Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1940 ATGGAACCACCACTTCGAGCTTCAGGAGGAGCTGAAGTACTTAAAAATATGTCTCCTGGATCATCAATTTCTGTTGCATATCACCCTCTTTTTGGACCTCATGATGATCTCATCTTTCTAGAGCTTGACGAGAAACTTCTCCCAGATCTTCTGCATGAAAGGGTGGTCTTAAGAGGACAGCCTGAAGAGGATGCATTTCTTTGTACTCCATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCTGTTTTGCTTGTACCACCAGCTAATCAATCAGAATATTGTGACAATCTACAAAAGAATGATAGTAATAGTTATGAGGAGAAAGTTGTTGCACCTGTAATCAAAGTTGTCCCTGGCAGTATGGAGCTTGTTGAGGTTGCGCCAAGACTTGATAAACTTAAATTGCTTCTTTCAGAGAACCCTTACAGGTTGGAGGAGAATGACATGGAAAATTTAGAAGAGAATGAAGCACCTATAACTGGATTATATAGCTGGAATGATCTCATAGACAATATTCAAGCTAGTGATGAGGAATTAAGGTCTGGACTGCAGGCTATTTCAGCTGTGGAGATTAATGGGTTTTGGAGATTAGTAGATGAGAGTTACATGGACATGATTCTGGGAATACTTTTGAGAAATTCAGTGTTGAATGACTGGTCATTTGATGCTCTTAATGAAGATGAAGTTATGACAACGCTGGAATCCGATGGATTTCCTAGAGTACTTGCAAGGCATTGTTTGCGTGTATATGGTGAGAAGGTAAATGATTTCATAAACAGCTGTGTCTGGAAGTTGGATGAGAAGAAGGTATGCATACATTATGCTAAAAAAATCCTTAAAGGAGGTAAGAGGAAGTTAGAGAGTTTTATGGATGAATGGAGGCAGATAACTCCAGATGGAATGCAGCCCACGTTTGATCTAGTGAAAGGAGAGGTATTGACAGAGAAAGTTGGAGTTGACACATGGGTTCACGCCTTCAGTGTCTCTTCGCTGCCTTCCACTCCAGCTGAACGTTTCTCCATTCTTTTCAGAGAGCGGCCGAAATGGGAATGGAAAGATCTGCAGCCATATATCAGTGATCTAAGTGTACCGGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAAGACACAGCCATCGCCTGATATGGAACCAGTTTTCAGTGCAAGATAA 1188 0.4082 MEPPLRASGGAEVLKNMSPGSSISVAYHPLFGPHDDLIFLELDEKLLPDLLHERVVLRGQPEEDAFLCTPSKTYAMKFVGTSNSVLLVPPANQSEYCDNLQKNDSNSYEEKVVAPVIKVVPGSMELVEVAPRLDKLKLLLSENPYRLEENDMENLEENEAPITGLYSWNDLIDNIQASDEELRSGLQAISAVEINGFWRLVDESYMDMILGILLRNSVLNDWSFDALNEDEVMTTLESDGFPRVLARHCLRVYGEKVNDFINSCVWKLDEKKVCIHYAKKILKGGKRKLESFMDEWRQITPDGMQPTFDLVKGEVLTEKVGVDTWVHAFSVSSLPSTPAERFSILFRERPKWEWKDLQPYISDLSVPGLSSEGLLLKYTRKTQPSPDMEPVFSAR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1940 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 14 395 IPR019128 GO:0007064|GO:0031390
Lja1g1940 395 Pfam Sister chromatid cohesion protein Dcc1 39 361 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1940 9 395 C3H Transcription Factor Family AT2G44580 54.962 1.79e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1940 K11271 - gmx:100807595 631.328