Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1928 ATGGAAAGGAGAAATTGTTGGAAGGATGTGGTTCCATTCACTGCAATGGTTACAGTTGAATGCACCAACGTTGGTGTTCAGGTTCTATTCAAAGCAGCTACTGAGAAAGGATTGAGTTACTATGTCTTCATTGCTTATTCATTTGCAGTCTCCACTCTTGTTCTCCTATTGCCTCTACCCTTCTTCATCCAAAGGTCAAGAGGGCTTCCACCATTGAAGGTGAATCTTATCTTCAAAATTTTCCTCCTTGGGGTGATGGGACTTGTAGCTCAGCTCTGTGGATATAAAGGACTTCAATATAGTTCACCGACACTTTCGTCTTCACTCAGCAACCTTATTCCGGCATTTACCTTCATCCTAGCCATCTTTTTCAGGATGGAGAAGGTAGCTTTAAGAAGCTCAAGCAGTCAGGCCAAAATCTTGGGTTCAACGATATCGATATTGGGTGCACTCACAGTTGTTCTTTATAAAGGCCCAACAATCTTCTCAACTTCATCATCTGCCAAAACCACGCCAACAATTGATTCTCCATTGGGCTCAACACCACAAAATTGGGTTCTTGGCGGATCTCTACTTGTTATTGAATTTTTTCTAGTTCCAGTGTGGTACATTGTTCAGACCACTGTCATGAAACAATATCCAGCAGAGATCATTGTGGTCTTCCTATACAACCTGTGCGGGACACTCATATCTGCACCGGTATGCTTACTATTGGAACAAAACTTAAGTGCTTGGAGGATAAATCCAGATGTGACATTGATCTCCATTTTGTACTCGGGATTTTTCAGCACAGGTCTAAGTTGTCTTGTCCACACTTGGGGCCTCCGTCTTAAAGGCCCTGTGTATATATCACTTTTCAAGCCTCTATCAATAGTCATTGCTACTTCAATGAGTGTTATATTCCTCGGTGATGCACTACATTTTGGAACTGTTGTTGGAGCAGTAATATTGTCAATTGGGTTTTATGCTGTTATATGGGGGAAAGCAAAAGAAGAAGAGCTGAGTGTGGATGACATAGTTAGAGCTCAACCTCCTCCTGATAATAAGACTCCTTTGTTGCAAAACTCCAATGGAGGAATCATTACGCATAACAATTGTTGTTAA 1104 0.4149 MERRNCWKDVVPFTAMVTVECTNVGVQVLFKAATEKGLSYYVFIAYSFAVSTLVLLLPLPFFIQRSRGLPPLKVNLIFKIFLLGVMGLVAQLCGYKGLQYSSPTLSSSLSNLIPAFTFILAIFFRMEKVALRSSSSQAKILGSTISILGALTVVLYKGPTIFSTSSSAKTTPTIDSPLGSTPQNWVLGGSLLVIEFFLVPVWYIVQTTVMKQYPAEIIVVFLYNLCGTLISAPVCLLLEQNLSAWRINPDVTLISILYSGFFSTGLSCLVHTWGLRLKGPVYISLFKPLSIVIATSMSVIFLGDALHFGTVVGAVILSIGFYAVIWGKAKEEELSVDDIVRAQPPPDNKTPLLQNSNGGIITHNNCC* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1928 367 PANTHER WAT1-RELATED PROTEIN 10 334 - -
Lja1g1928 367 PANTHER WAT1-RELATED PROTEIN 10 334 IPR030184 GO:0016021|GO:0022857
Lja1g1928 367 Pfam EamA-like transporter family 193 325 IPR000620 GO:0016020|GO:0016021
Lja1g1928 367 Pfam EamA-like transporter family 35 154 IPR000620 GO:0016020|GO:0016021
Lja1g1928 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 330 - -
Lja1g1928 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1928 Lja-Chr1 22060280 22065537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1928 2 355 Nodulin-like Gene Family AT5G40240 55.556 1.21e-137 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1928 - - mtr:MTR_1g014510 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1928 1 22060280 22065537 Lja1g1928 1 22060280 22065537 ECH
Lja2g0999 2 9430367 9432551 Lja1g1928 1 22060280 22065537 ECH