Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1924 ATGGATCTGGAGTCTGTGGTTTACAGAAACCCAATTAAGAAGGAATCATGGAGGACAGTGTTAACTTTAGCTTACCAGAGCTTGGGAGTAGTCTATGGAGATTTGAGCACATCCCCACTTTATGTTTACAAGAGCACTTTTGCTGAGGACATTCAGCATTCAGATACCAATGAAGAAATATATGGAGTCTTGTCTTTTGTGTTCTGGACTCTTACATTGATTCCACTCCTAAAGTATGTGTTCATTGTGCTCAGAGCAGACGACAATGGCGAAGGAGGAACTTTTGCTCTGTACTCGTTGCTGTGCCGGCATGCCCAGGTAGGATTGTTGCCTGATGTTCAGCTAGCAGATGAGAAGCTAATAGAATACACTAAGGGTGATGGAACAGTTCCAATTAATAAGAGAAATGTTGGGTCGGTGTTGAAATCTTTGTTGGAGAAGCACAGGGTGCTGCAGAGGGTCCTTCTTGTTCTGGCTTTGATAGGGACTTGCATGGTCATTGGTGATGGTGTTCTAACACCTGCACTTTCTGTTTTCTCTGCTGTGTCAGGCTTGGAGCTTTCCATGTCTAAAGAGCACCACCGATATGTTGAAGTCCCAGTTGCTTGCATAATTCTGGTATTTTTGTTTTCACTTCAACATTATGGGACCCATCGTGTGGGAATCTTGTTTGCACCTGTTGTGATGACATGGCTGCTATGCATAAGTGGTATTGGTTTGTATAACATCTTGCACTGGAACCCCCATGTTTATCGAGCATTCTCTCCAGTATACATGTTCAAATTCCTCAAGAAGACTCAAAGGGGAGGTTGGATGTCATTGGGTGGGATTCTACTGTGCATAACTGGTTCTGAAGCTATGTTTGCTGATCTAGGACACTTCTCACAGTTATCAATTCAGATTGCTTTCACATTTTTGGTGTACCCTGCTTTGATCCTGGCATATATGGGACAAGCTGCATACCTATCCAAGCATCATGCTATTGAAAGTGATTACCGAATTGGGTTCTATGTATCTGTACCTGAGAAACTTAGATGGCCTGTTCTTATAATAGCCATACTTCAATCTGTGGTTGGAAGTCAAGCTATCATCACAGGGACTTTCTCAATAATCAAACAATGTTCTGCCATGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAAGTACATGGCCAGATTTATATTCCAGAGATCAACTGGTGCTTGATGCTTCTTTGCCTCGCCATTACTATTGGATTTAGAGATACAAAACGAATGGGAAATGCATCAGGTTTGGCTGTCATAACTGTCATGCTGGTGACTACTTGTCTAATGTCTCTAGTTATGGTCTTATGCTGGCATAAAAGTGTTTTACTAGCCCTTGGCTTCATCTTCTTCTTCGGCTCCATCGAGACACTCTACTTCTCCGCATCCCTCATCAAGTTCCTTGAAGGTGCTTGGGTCCCCATCGCCCTATCCCTCATCTTTCTCATTATCATGTGTGTGTGGCACTATGGCACACTCAAGAAGTATGAGTTTGATGTTCAAAACAAGGTTTCCATCAACTGGCTCCTTGGTTTGGTTCCCACTCTAGGAATTGTGAGAGTCAAGGGAATTGGCCTAATACATACCGAACTTGTGTCCGGGATCCCAGCAATTTTCTCTCACTTTGTAACCAATCTTCCAGCTTTTCATCAAGTTGTGATATTTCTTTCCATCAAATCTGTCCCGGTTCCGCATGTCAGAGCTGAAGAAAGGTTCTTAGTAGGTAGAGTTGGCCCAAAGGAGTACCGGCTTTACAGGTGCATAGCACGGTATGGCTATCGCGACATTCACAAGGACAATATGGAGTTTGAGAAAGATCTTATTTGCAGCATAGCAGAATTTATCCGCTCCGGTACTTCAGAATGTGATGTAGGATTTGAGAGTTTTGAAGATGATACAAAGATGACAGTTGTGGGGACTTCAGCATCGAACACGGAATGTGTAAGAATGTGTGAAGATAATGATGATAAGGATATTTCTCAGATGGAAGATGCCTCAGAATTGAGGGGGGTTAAGGCTCCTGAAAAAGTGAAGAAGCGAGTGAGGTTTGTTGTGCCGGATAGTCCACAAATTGATTTGGGAACAAGGAAGGAGTTGCAGGAGCTGATGGAAGCAAGGGAAGCTGGAATGGCATTCATAATGGGACACTCATATGTGAGAGCAAAAAGAGGATCAAGTTGGATAAAGAAAGCTGTGATCAATTATGGGTATGATTTCTTAAGAAGAAACTCTAGAGCACCAACTTATGCTGTAAGTATCCCTCAAGGATCTACCTTAGAGGTGGGAATGGTCTATCATGTCTGA 2337 0.4283 MDLESVVYRNPIKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSDTNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHAQVGLLPDVQLADEKLIEYTKGDGTVPINKRNVGSVLKSLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEHHRYVEVPVACIILVFLFSLQHYGTHRVGILFAPVVMTWLLCISGIGLYNILHWNPHVYRAFSPVYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIQIAFTFLVYPALILAYMGQAAYLSKHHAIESDYRIGFYVSVPEKLRWPVLIIAILQSVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSLVMVLCWHKSVLLALGFIFFFGSIETLYFSASLIKFLEGAWVPIALSLIFLIIMCVWHYGTLKKYEFDVQNKVSINWLLGLVPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLSIKSVPVPHVRAEERFLVGRVGPKEYRLYRCIARYGYRDIHKDNMEFEKDLICSIAEFIRSGTSECDVGFESFEDDTKMTVVGTSASNTECVRMCEDNDDKDISQMEDASELRGVKAPEKVKKRVRFVVPDSPQIDLGTRKELQELMEAREAGMAFIMGHSYVRAKRGSSWIKKAVINYGYDFLRRNSRAPTYAVSIPQGSTLEVGMVYHV* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1924 778 Pfam K+ potassium transporter 25 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja1g1924 778 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja1g1924 778 PANTHER POTASSIUM TRANSPORTER 6 1 778 - -
Lja1g1924 778 TIGRFAM kup: potassium uptake protein 23 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1924 Lja-Chr1 22023047 22030513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1924 1 776 Inorganic Solute Cotransporters AT5G14880 75.928 0.0 1203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1924 K03549 - gmx:100793387 1334.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1924 1 22023047 22030513 Lja1g1924 1 22023047 22030513 ECH