Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1895 ATGCAACATCAACCTCACCGTGACTTCCCTACTAAACCCCCTTCTTCCACCGTCTCCCTTGACGCCGATGGGAAAACCACCGACTTCCGCCCATTCTCCGCCGCCAAGTCACCGCAAATGCGCACCTTCCATCTCTCATGGCTAAACCTCTTCTCCTGCTTCTTCGCCACCTTCTCCATCCCCCCTCTCATCCCCATCATCCGTGACGACCTCCACCTCACCGCCTCCGAAATCGGCGCCGCTGGCTCCGCCTCCTTCGCCGGCGCCATCGTCTCCCGCCTCCTCATGGGGCCCATCTGCGACCTCGTGGGCCCGCGCATCGCCTCCGGGACCCTCTCACTCATCACCGCCCCGATCATCCTAGCAACCTCCCTCGCCTCCACCCCTCAATCCTTCATCATCATCCGATTCCTCGTCGGATTCTCCATCGCCACCTTCGTCTCCAACCAGTTCTGGACCAGCTCCATGTTCTCCCCCTCCTGCGTCGGCGCCGCTAACGCCGTCGCCGCCGGGTGGGCCAACATGGGCTCCGGCGTCACACAGCTCCTCATGCCCCTCCTCTACTCCCTCATCATGTCCCTCTTCCACGTCCCTTCCTCCACCGCGTGGCGATTATCCTTCATCCTCCCGGCGATTTTCCAAGCCCTCACAGGTATCTTAGTGTTGGCGTTCGGGCATGATCCGGTGCCATCGCGTAACCGCAAAGTGGGGCCGAAGGAGAGCGTGTTCAGCGTGGTGATGGGCGGTTTAAGGGACTACAGAGGGTGGATTCTGGGCTTACTCTACGGATTTTGTTTCGGTGTAGAGATGACAACGGACAACATCATAGCGGGTTACTTCTACGACAGGTTTGGGGTGAACCTACAAACAGCGGGGACCATCGCGGCGTGTTTCGGGATGGCGAATTTCTTCTCGCGGCCGACGGGAGGGTTGGTTTCCGACGCAATGGGGAAGAGGTTCGGTGTTCGAGGGAGATTGTGGGCTCTGTGGGTGGTGCAGACGGTGGCGGGTTTGCTGTGCGTTTTGCTGGGGCGAGTTAACTCGCTGTGGAGCTCGATCGTAGTGATGTGTTGTTTCTCAGTGTTTGTTCAAGCTGCTTCTGGCCTCACGTTTGGCGTGGTCCCTTTTGTTTCAAGCAGATCACTAGGGGTAATATCAGGAATGACAGGGAGTGGTGGGACGATTGGGGCTGTTGTCACTCAATTGCTCCTGTTTTCCGGGGACACCATGTCAAAGCAAACAAGCATATCCTTGATGGGACTGATGATGATAATTTGTACTCTTCCAGTAACCTTGATCTACTTCCCTCAAGGGGGAGGCATGTTTTGTGGTCCTACCTCAAATGATGATCCCCTCGAAGAAAATTATACCTTGCTGGAGTAG 1383 0.5691 MQHQPHRDFPTKPPSSTVSLDADGKTTDFRPFSAAKSPQMRTFHLSWLNLFSCFFATFSIPPLIPIIRDDLHLTASEIGAAGSASFAGAIVSRLLMGPICDLVGPRIASGTLSLITAPIILATSLASTPQSFIIIRFLVGFSIATFVSNQFWTSSMFSPSCVGAANAVAAGWANMGSGVTQLLMPLLYSLIMSLFHVPSSTAWRLSFILPAIFQALTGILVLAFGHDPVPSRNRKVGPKESVFSVVMGGLRDYRGWILGLLYGFCFGVEMTTDNIIAGYFYDRFGVNLQTAGTIAACFGMANFFSRPTGGLVSDAMGKRFGVRGRLWALWVVQTVAGLLCVLLGRVNSLWSSIVVMCCFSVFVQAASGLTFGVVPFVSSRSLGVISGMTGSGGTIGAVVTQLLLFSGDTMSKQTSISLMGLMMIICTLPVTLIYFPQGGGMFCGPTSNDDPLEENYTLLE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1895 460 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g1895 460 Gene3D MFS general substrate transporter like domains 241 440 IPR036259 -
Lja1g1895 460 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 438 IPR020846 GO:0022857
Lja1g1895 460 PANTHER HIGH AFFINITY NITRATE TRANSPORTER 2.7 14 451 - -
Lja1g1895 460 Pfam Major Facilitator Superfamily 47 399 IPR011701 GO:0022857|GO:0055085
Lja1g1895 460 MobiDBLite consensus disorder prediction 9 23 - -
Lja1g1895 460 Gene3D MFS general substrate transporter like domains 34 233 IPR036259 -
Lja1g1895 460 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 14 451 IPR044772 GO:0015112
Lja1g1895 460 CDD MFS_NRT2_like 43 432 IPR044772 GO:0015112
Lja1g1895 460 SUPERFAMILY MFS general substrate transporter 3 434 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1895 Lja-Chr1 21678707 21681615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1895 11 445 Inorganic Solute Cotransporters AT5G14570 63.020 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1895 K02575 - cit:102627329 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1895 1 21678707 21681615 Lja1g1895 1 21678707 21681615 ECH