Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1878 ATGATGAACTCACACAAGCAACTGTTTTACCACTTGCGCCTTTTCCTACCATTTCTTCTTCTCTCGGGACAAATAATGGGGATACAAGCTGATACTACAAATAAATTGTTCGTTTTTGGAGACTCCTTTGTTGATGGGGGCAACACACCCAAAGATGGATCTATCGGTAGAGTTATATCTAGTTACAGTGGTAGCGCTCTCGCTCCCGCTGTCCCTCTCTCTGATGCTTGGAAAGAGCCTTACGGCAAGACCTTTCCCGGAGAACCCGCTGGAAGGTTTTCGGACGGTAGAGTTCTTTCTAACTATATCGCTATGCATTTGGGACTGCCATCACCGCCAGTACCTTACGAATCTAGGAATGATGTACCATCAGACGATTTGAAGAATGGGATAAACTTTGCTTATGGTGGCACAGGATTGAATGATACAATCGTTCCACTCCCAAATATGACTGTGCAGATCAATTTCTTTGAGAAGCTCGTAGAAGAAAATGTGTACAATGTCATAGATCTCAGCAATTCTATGGCTATGCTCTCCTCTTTTGGAAATGACTACCTTTATTTCTTGAGTACAGGGGGCACAGTCTGGAATGTCAGGCCTTTCACCAGGAAGTTGGTTGATCAAATGACCACCAATTTGATTCGCGTCCAAAGGTTAGGAGTGAAGAAAATTGCAGTGACTAGTGTACCACCCTTTGGTTGTATACCTGTATTGTCAGCGCAACTCCCTTATAGTTGCTTATTTGACCTCATTTTTAACCCTGTCTCTACTTTCCACAACAACTTGTTGAAGGAAGCTGTTACCACACTGAACCAAGTAACCACCGATGGCACCACCTTCTTATTTCTTGACCTTTATGAAAGTTTCTTGTCAGTTATCAGCAATCCATCTGCTAATAACATCACAAATGATTATTCTTGTGGAAATGTGGATGAGAACAATGAGCCGAAATATACGGTTTGTGAAAATCCAGAATCAACTCTGTTTTGGGATTCGGTTCATCCATCGCATGTAGGTTGGCAAGCAGTGTATAACAACTTGGAGAAAGGGGAGCTTGGTCGTGGTCGCCTTCAATTCTAG 1080 0.4287 MMNSHKQLFYHLRLFLPFLLLSGQIMGIQADTTNKLFVFGDSFVDGGNTPKDGSIGRVISSYSGSALAPAVPLSDAWKEPYGKTFPGEPAGRFSDGRVLSNYIAMHLGLPSPPVPYESRNDVPSDDLKNGINFAYGGTGLNDTIVPLPNMTVQINFFEKLVEENVYNVIDLSNSMAMLSSFGNDYLYFLSTGGTVWNVRPFTRKLVDQMTTNLIRVQRLGVKKIAVTSVPPFGCIPVLSAQLPYSCLFDLIFNPVSTFHNNLLKEAVTTLNQVTTDGTTFLFLDLYESFLSVISNPSANNITNDYSCGNVDENNEPKYTVCENPESTLFWDSVHPSHVGWQAVYNNLEKGELGRGRLQF* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1878 359 Pfam GDSL-like Lipase/Acylhydrolase 36 345 IPR001087 GO:0016788
Lja1g1878 359 SUPERFAMILY SGNH hydrolase 35 347 - -
Lja1g1878 359 PANTHER OSJNBB0059K02.9 PROTEIN 29 349 - -
Lja1g1878 359 Gene3D SGNH hydrolase 27 350 IPR036514 -
Lja1g1878 359 PANTHER OSJNBB0059K02.9 PROTEIN 29 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1878 Lja-Chr1 21438614 21441159 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1878 34 343 Pollen Coat Proteome AT1G75930 25.688 3.25e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1878 - - lja:Lj1g3v3688890.1 672.159