Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1858 ATGGTTGAGTTGTTGGCCATCATATTGGTTTTCTTCTCAGGCCTTGTTGCCTTTACTTATCTTCTCAAACATCATAACAAACCAGATTCCACACACAAATTGCCCAATGGAAACATGGGGTGGCCCTTATTTGGTGAGACTCTTAGCTTTCTCAAATCCCACAAATCAAACACCTTGGGATCCTTCTTACAACAGCATTGTTCAAGGTATGGCAAAGTTTTCAGGTCGCATCTGTTTGGTTATCCCACCATTGTTTCATGTGACTTTGAGCTCAACATGTTCATTCTTCAGAATGAAGGGAAGTTATTCCCCGCTGATTACCCCAAGGTAATGCATAAAATCTTGGGGAAGTTCGCTTTGCTTCTTGTCGCTGGAGACCTTCACAAGAAGATAAGAAACCCCATTGTCAATATTGTGAATGCATCAAAATCCGACTCCAAGTTCCTTCACTGTGTAGAAAAGCTTGCACTATCAAAGATTGTTTCTTGGCAGCTAAACTGTAACAAACAAGTTGCTTTCTACATAGAAGCTAAAAGGTTTTCAATGAATGTTATGTTGAAGCACCTTCTAGACATTGATCCAGATGAGCCACTGGCCTCCAAGATTTTGGAAAACTTTGAGAACTATATCAAGGGCTTTGTTTCGTTGCCTTTAAATATTCCTGGGACTGCATATTCCAAAGCTCTTCAGGCAAGAATAAGACTCTCATCAATTATCAAAGATATTATCATGGAGAGGAGGAATAAAGGTAATATCAATGTGGGCCCTATGGAAGGAGGGGACCTGTTGAATGTGATTTTGTCAAAGCAGAATCTATGTGATGAAGAGATGGTGAGCATTGTGTTGGACCTCTTGTTTGGAGGTTATGAGACAACTGCAAAACTTTTATCCTTGATTGTCTATTTCCTAGTGGGAGTCCCTGATGCTTTAGCAAGGTTAAAGGATGAACACCAGGTGATAAGGAAAAGCAAAAAGGAGAGAGAACTATTGAACTGGGAAGACTATAAGCAGATGGAGTTCACTCAAAATGTGATAAATGAAGCTTCCAGATGTGGGAATGTAGTCAAATTTCTACACAGGAAAGCTGTTCAAGATGTCAAATTCAAAGAGTTTGTGATACCCGCCGAGTGGAAGGTTCTTCCTGTCTTGTCAGCTGGACATTTGGATCCCACACTTTATGAAAATCCTCAGGAGTTCAATCCCTCCCGTTGGAATGACAAGACAAGCAAGAAAGTGGCAGCATTTGGTGGTGGTCCACGACTTTGTCCAGCGGCTGATCTAGCTAAAGTGGAGATAGCATTCTTCCTTCATCATCTTGTCCTGAATTATAGGTGGAAAATGAACACAGATGACCACCCAATTGCTTTCCCTTACGTGGAGTTCACCGGAGGGCTGATATTGGATCTTGAACCCACAAACCCTACTTTTGGGGAGCACCCTTGA 1443 0.4165 MVELLAIILVFFSGLVAFTYLLKHHNKPDSTHKLPNGNMGWPLFGETLSFLKSHKSNTLGSFLQQHCSRYGKVFRSHLFGYPTIVSCDFELNMFILQNEGKLFPADYPKVMHKILGKFALLLVAGDLHKKIRNPIVNIVNASKSDSKFLHCVEKLALSKIVSWQLNCNKQVAFYIEAKRFSMNVMLKHLLDIDPDEPLASKILENFENYIKGFVSLPLNIPGTAYSKALQARIRLSSIIKDIIMERRNKGNINVGPMEGGDLLNVILSKQNLCDEEMVSIVLDLLFGGYETTAKLLSLIVYFLVGVPDALARLKDEHQVIRKSKKERELLNWEDYKQMEFTQNVINEASRCGNVVKFLHRKAVQDVKFKEFVIPAEWKVLPVLSAGHLDPTLYENPQEFNPSRWNDKTSKKVAAFGGGPRLCPAADLAKVEIAFFLHHLVLNYRWKMNTDDHPIAFPYVEFTGGLILDLEPTNPTFGEHP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1858 480 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PANTHER CYTOCHROME P450, FAMILY 724, SUBFAMILY A, POLYPEPTIDE 1 37 471 - -
Lja1g1858 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Lja1g1858 480 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 Pfam Cytochrome P450 35 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 SUPERFAMILY Cytochrome P450 32 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1858 480 PANTHER CYTOCHROME P450 26 37 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1858 Lja-Chr1 21151600 21155876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1858 39 368 Cytochrome P450 AT5G14400 53.030 1.84e-126 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1858 K12639 - gmx:100791737 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1858 1 21151600 21155876 Lja1g1858 1 21151600 21155876 ECH