Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1814 ATGCCAAGTGTGGCTGTCAAGCTCTATAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTCTACAGAACCGAATTCAAGCCCCACCGGAAACCTCCGACCCGTTTGGCGTCACCTCACGACCCGAAGAATCCGTCGCCGCCGCCAATCCTTCCTTCACCGACGGCGTCGCCACCAAAGACATCCACATCGACCCATTCACCTCTCTCTCCGTCCGAATCTTCCTTCCCGAATCCTCACTCTCCCCGCCCGAGCCTCATTCCAAACCTCACCCGTCTTCCAAGCCTAGGTCCCACCCTGTCTACGATCCACAGCGCGGATCTGATCCGAGCTCGCGGCGGAACAGCTACCCGCACCGGGATGAGCCTCGGGGGAACAGTTATGGACCCAGCAATGGCGTTGAGGGTTTGAATTTGATGTCCGGCGGCGCCGCCGCCGGCTACCGGGGGTACGCGCCGGGGATGGAAGGTCGCAGGAGGAAGCTACCGGTGATGCTGCAGTTCCACGGCGGAGGTTGGGTCAGCGGGAGCAATGATTCAGTGGCGAATGATGTGTTTTGCCGGCGGATGGCGAAGCTATGTGATGTGATTGTGGTGGCTGTTGGGTATCGGTTGGCGCCGGAGAGTCGGTACCCGGCGGCTTTTGATGATGGGATGAAGGTGCTGACTTGGCTGGCGAAGCAGGCGAATTTGGCAGAGTGTAGCAAGTCGATGGGGGTTGGAAGGATTGGTGGTGGTGCTGGTAGTGAGTTCAACAAATCAGATGCTCATAGGCACATTGTTGATACCTTTGGAGCTTCAGTGGTTGAGCCTTGGTTGGCTGCTCATGGAGATCCGACAAGATGTGTCCTTATTGGAGCGAGTTGTGGTGCAAATATAGCAGACTACGTGGCTCGGAAAGCTGTGGAAGGAGGCAAACTTCTAGACCCTGTCAAGGTCGTAGCACAGGTCCTGTTGTATCCATTTTTTGTTGGAAGTGTTCCCACACATTCTGAAATAAAGTTGGCAAACTCCTACTTTTATGACAAGGCCATGTGTATGCTTGCATGGAAGCTTTTCCTACCCGAGGATGAATTCAGTTTGGACCATCCAGCTGCTAATCCCCTTGTCGCAGGACGGTCTCCTCCATTAAAGCTTATGCCCCCAACGTTGACAGTGGTGGCAGAGCACGACTGGATGAGGGATCGAGCCATTGCTTACTCGGAGGAGCTTCGGAAGGTGAATGTTGATGCACCTGTTCTTGAGTATAAGGATGGAGTACATGAATTTGCGACGCTTGACGTACTTCTCAAAAGCCCCCAGGCCCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAATATATTTCACTTCGAGGTCATGAATTCTCATATTGA 1377 0.5389 MPSVAVKLYSVFFKFLLKHRLQNRIQAPPETSDPFGVTSRPEESVAAANPSFTDGVATKDIHIDPFTSLSVRIFLPESSLSPPEPHSKPHPSSKPRSHPVYDPQRGSDPSSRRNSYPHRDEPRGNSYGPSNGVEGLNLMSGGAAAGYRGYAPGMEGRRRKLPVMLQFHGGGWVSGSNDSVANDVFCRRMAKLCDVIVVAVGYRLAPESRYPAAFDDGMKVLTWLAKQANLAECSKSMGVGRIGGGAGSEFNKSDAHRHIVDTFGASVVEPWLAAHGDPTRCVLIGASCGANIADYVARKAVEGGKLLDPVKVVAQVLLYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEDEFSLDHPAANPLVAGRSPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDGVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1814 458 SUPERFAMILY alpha/beta-Hydrolases 34 449 IPR029058 -
Lja1g1814 458 MobiDBLite consensus disorder prediction 27 51 - -
Lja1g1814 458 PANTHER ARYLACETAMIDE DEACETYLASE 20 438 - -
Lja1g1814 458 MobiDBLite consensus disorder prediction 77 134 - -
Lja1g1814 458 PANTHER CARBOXYLESTERASE 16-RELATED 20 438 - -
Lja1g1814 458 Gene3D alpha/beta hydrolase 36 453 IPR029058 -
Lja1g1814 458 Pfam alpha/beta hydrolase fold 164 423 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1814 Lja-Chr1 20550385 20555661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1814 1 458 Carbohydrate Esterase AT3G27320 73.753 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1814 - - gmx:100775445 729.554