Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1783 ATGCGGATCTCAACTACCATCCACGCAAAACGCGGCCCAACATTGCTCGCCGCAACAGAATCAGAGATCGCAACACTAGAAAGAAACCCTTTACGCTTGTGGTTCGGATTCTCTCCACAAAACGACGTCGTTCGCGCACTGTACATCACACTCCGCGTTTCGTTCCTGACCTCGATCGTCGCGCCACCCTCACCGCGCCGCGCTCGAAGTCCGGCCACTGTCGCAAGGCCTCCGTTGCTAGCTACTACTCATCGTTCTGTATCTCTGCCGGATCCCGCCGCCGCCGCCAATTTTCCGGGCATTGTCTTTGATTTCTCAAAAGTTGGAAGAGAAGGGATGGCTGGGCAATCGGACAATGAGCTCTCATTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGACGAGACGGTCGAAATCGTACCCAAATTCAAAATGGACCCTCTTTGTTTCATCTCGGGAGATTTTGGCCCATTTTCGCCAAATGTTCCTACTCAAGTACCAATTTGGCTTGCCATTGCTCTCAAGAAGAGAAGCAAGTGTGTTATTCGCCCTCCCCAATGGATGACTGTAGAGAAGTTGACTCAAATTTTGGAGGCAGAGCGAGACTCTCAAGAGATGTCAGAACAATTGCCATTTCATTATATAGAAATCTCAAGACTTCTTTTTAACCACGCACGTGACAACATTGCTGATGATTATATGGTGAGGTCTCTCATTGAGGACATCAGAAATGTTAGGTTTCATAAAATTGAAACTGACTTGGAGGCATTTAATGGTCGTACAATTGCTGTTAAGATAAAAAATTTATCTGCCATGGAAGTAAATATCGTTCGGCCATTTATTGGAAGAGCTTTACAGGCATTTTATAAGCATGATAGCCCAGATTTGATCCCAGACCCAGAGAGAGTTTCTGACAGACGGCCACAAGCTGCCAACAACAATGCCCCAAGAGTATCCTCACCACCTCTCTCACAAATATGTCAGCTATCACCTTTGCTGTATAGGGGTGCTTGA 1017 0.469 MRISTTIHAKRGPTLLAATESEIATLERNPLRLWFGFSPQNDVVRALYITLRVSFLTSIVAPPSPRRARSPATVARPPLLATTHRSVSLPDPAAAANFPGIVFDFSKVGREGMAGQSDNELSLFSAEELEFIAEDETVEIVPKFKMDPLCFISGDFGPFSPNVPTQVPIWLAIALKKRSKCVIRPPQWMTVEKLTQILEAERDSQEMSEQLPFHYIEISRLLFNHARDNIADDYMVRSLIEDIRNVRFHKIETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPDLIPDPERVSDRRPQAANNNAPRVSSPPLSQICQLSPLLYRGA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1783 338 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 113 315 IPR007257 GO:0005634|GO:0006260
Lja1g1783 338 MobiDBLite consensus disorder prediction 297 323 - -
Lja1g1783 338 Pfam GINS complex protein 165 274 IPR021151 -
Lja1g1783 338 SUPERFAMILY GINS helical bundle-like 185 293 IPR036224 -
Lja1g1783 338 CDD GINS_A_psf2 178 294 - -
Lja1g1783 338 Gene3D - 124 189 - -
Lja1g1783 338 SUPERFAMILY PriA/YqbF domain 124 183 - -
Lja1g1783 338 Gene3D - 190 297 - -
Lja1g1783 338 MobiDBLite consensus disorder prediction 308 323 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1783 113 259 Core DNA Replication Machinery Family AT3G12530 65.306 3.11e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1783 K10733 - gmx:100780528 346.665