Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1764 ATGGAGATCATAAGGATAGTATTAATGACGTCTGTGATGGCTTTTACGATCATATATAGAGGAGAAGGTCAATTAGTAGAGAATTTCTACACTTCAACTTGTCCAAACGTTGAATTCATCGTGGCCCAAGCAGTGACCACCAAGTTCACCCAGACCATCACCACTGGACAAGCAACCCTGCGTCTATTTTTGCATGACTGTTTTGTTGAGGGATGTGATGCGTCCGTGATAATAGCATCGCCAAATGGGGATGCAGAGAAGGATGCATCGGAAAATCTTTCACTACCAGGTGATGGATTTGATACAGTGATCAAGGCTAAGCAAGCTGTTGAAGTTGCATGCCCAGGAGTGGTCTCATGCGCTGACATTTTGGCACTCGCTGCCAGAGATGTCATAGCCTTGCTTGGAGGTCCATCATTCAACGTGGAACTAGGACGCAGAGACGGTCTCATTTCAAAAGCATCACGCGTTGCAGGAAACCTTCCAAAACCAAACTTCAACCTTAACCAACTCAACACCATGTTCTCCAACCACAACCTCACCCAAACCGACATGATCGCACTTTCAGGAGCACACACGGTCGGCTTCTCACACTGCAACGAGTTCTCCAACCGCATATACTCCTCCCCAGTGGACCCCACTCTGGACCCCACCTACTCCCAGCAGCTCATCGCAGAGTGTCCTAAAAACCCTGACCCTGGCGTGGTGGTTGCTCTGGATCCTGAAACATCTGCAACCTTTGACAATGAGTATTATAAAAACCTTGTTGCTGGGAAGGGGTTGTTGGCTTCGGATCAAGTGTTGTTTACAGACCCTGCTTCGAGGGCTACGGTGGTTGAGTTTGCGAATAATGGTGGTGAGTTTAATGGGGCGTTTGTGGCGGCTATTAGGAAGCTTGGGAGGGTGGGGGTTAAGACTGGTAAGGATGGAGAAGTTAGGAGGGATTGCACTAGATTCAATTGA 963 0.4818 MEIIRIVLMTSVMAFTIIYRGEGQLVENFYTSTCPNVEFIVAQAVTTKFTQTITTGQATLRLFLHDCFVEGCDASVIIASPNGDAEKDASENLSLPGDGFDTVIKAKQAVEVACPGVVSCADILALAARDVIALLGGPSFNVELGRRDGLISKASRVAGNLPKPNFNLNQLNTMFSNHNLTQTDMIALSGAHTVGFSHCNEFSNRIYSSPVDPTLDPTYSQQLIAECPKNPDPGVVVALDPETSATFDNEYYKNLVAGKGLLASDQVLFTDPASRATVVEFANNGGEFNGAFVAAIRKLGRVGVKTGKDGEVRRDCTRFN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1764 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Lja1g1764 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Lja1g1764 320 Gene3D Peroxidase, domain 2 162 299 - -
Lja1g1764 320 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1764 320 PANTHER PEROXIDASE 6 320 - -
Lja1g1764 320 Gene3D - 28 320 - -
Lja1g1764 320 PANTHER - 6 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1764 Lja-Chr1 19962222 19965292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1764 6 320 Peroxidase AT5G14130 63.009 1.75e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1764 K00430 - gmx:100791275 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1764 1 19962222 19965292 Lja1g1764 1 19962222 19965292 ECH