Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1763 ATGAGCGGGTTTCAGGAGAGGTTCTTGTCTCTGTACAAGAGCAGATGGCTGGTGTTTGTGGCTGCAATGTGGTTGCAATCATGGGCAGGTATTGGGTACTTGTTTGGAAGCATCTCACCTGTTATCAAAAGCTCCCTCAACTACAATCAGAAGCAGGTTGCCATGTTGGGTGTTGCCAAGGATCTTGGTGACTGTGTTGGATTCCTCACTGGGATCTTGTGTGAGATTTTGCCTATTTGGGGTGCTCTTCTTGTTGGTGCTGCTTTGAACCTTGTTGGGTATGGTGTGGTTGGGTTGGTTGTCATTGGTCAACTTCCAGTTCTCCCTTTATGGGCTATGTGCGTTCTTATATTTGTGGGAACAAATGGTGAAACCTACTTTAACACAGTTTCTCTGGTGTCTTGTGTGCAAAATTTCCCCAAAAGCCGGGGACCTGTGGTCGGAATTCTGAAGGGCTTTGCTGGGTTGAGTGGTGCAATATTGACACAAATATATGCAGTTATCCATTCCCCAAATCACGCATCTTTGATATTTATGGTTGCTGTAGGTCCATCATTGGTAGCAGTAGGTCTAATGTTCATTGTTAGACCTGTGGGAGGTCACAAACAAGTGCGGCCTTCAGACGGCAGAAACTTCACACTTGTTTATGGCGTGTGCCTCCTGTTGGCTGCTTATTTGATGGGAGTCATGGTTGTCCAAGATCTAGTTGATCTGAGCGAAGCTGTTATCACAATTTTTACAGTGATCCTCATCGTGATCCTCCTCGTCCCAATTGTGATTCCTATCTCATTGAGTTTCGGCCCGGAACAAAAACCTCCAGAGGAAGAGGCACTTCTTCCAGGACCACAGACTAATGAACCAGGAAAATCTCAACTTGATACTGATGAAGTAATATTAAGTGAGATGGAAGATGAGAAGCCTAAGGAGGTGGACATGCTTCCTGCACCAGAAAGGCAAAAGCGTATAGCCCAATTACAATCAAGGCTACTCCAAGCTGCCGCAGAAGGAGCTGTGAGGGTTAAGAGGAGAAGAGGACCACACAGAGGGGAGGACTTTACCTTGACACAAGCTTTGATTAAAGCAGACTTTTGGCTTCTTTTCATGTCCATGGTCTTGGGTTCTGGATCCGGGTTGACCGTAATTGACAATCTCGGTCAGATGAGCCAGTCTCTAGGATATGACAATTCACATATATTCGTCTCCTTGATCAGTATTTGGAACTTTCTTGGCCGCGTTGGAGGGGGTTACATATCTGAGATTATTGTGAGGGATCATGCCTACCCGAGACCAGCTGCATTGGCTGTATTTCAACTTATTATGGCAGTTGGGCATCTGTTCATTGGTATGGGATGGCCAGGGTCAATGTATGTCGGCACTTTACTAGTTGGACTCGGTTACGGTGCTCACTGGGCAGTTGTTCCAGCTACTGCATCCGAGCTGTTTGGTTTGAGAAACTTTGGTGCATTGTACAATTTCATTACTTTGGCAAACCCTGTAGGAACTCTTGTCTTCTCTAGTCTAATAGCCAGTAGAATCTATGATTATGAAGCAGAGAAACAAGCTCATGGTGGCCATCTCCATAATATAGGATCACTTGTGTCGAATGTGCTTAATGCCGGTGGGTCACTAAAGTGTGAAGGTTACATATGCTTTTTCTTGACTTCCATTATCATGGCAGGGTTTTGCATAGTTGCAGCAGGGTCATGCATGTTTCTTGTATTCCGAACTAGAGTTGTTTATGCCAACCTATATGGAAAATCTTCTACTACTAGGGTTCAATAA 1782 0.4501 MSGFQERFLSLYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLNYNQKQVAMLGVAKDLGDCVGFLTGILCEILPIWGALLVGAALNLVGYGVVGLVVIGQLPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAVIHSPNHASLIFMVAVGPSLVAVGLMFIVRPVGGHKQVRPSDGRNFTLVYGVCLLLAAYLMGVMVVQDLVDLSEAVITIFTVILIVILLVPIVIPISLSFGPEQKPPEEEALLPGPQTNEPGKSQLDTDEVILSEMEDEKPKEVDMLPAPERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFMSMVLGSGSGLTVIDNLGQMSQSLGYDNSHIFVSLISIWNFLGRVGGGYISEIIVRDHAYPRPAALAVFQLIMAVGHLFIGMGWPGSMYVGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPVGTLVFSSLIASRIYDYEAEKQAHGGHLHNIGSLVSNVLNAGGSLKCEGYICFFLTSIIMAGFCIVAAGSCMFLVFRTRVVYANLYGKSSTTRVQ* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1763 593 CDD MFS_Mch1p_like 14 566 - -
Lja1g1763 593 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 587 - -
Lja1g1763 593 Pfam Nodulin-like 15 262 IPR010658 -
Lja1g1763 593 Gene3D MFS general substrate transporter like domains 359 581 IPR036259 -
Lja1g1763 593 MobiDBLite consensus disorder prediction 271 291 - -
Lja1g1763 593 SUPERFAMILY MFS general substrate transporter 7 201 IPR036259 -
Lja1g1763 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 587 - -
Lja1g1763 593 SUPERFAMILY MFS general substrate transporter 213 577 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1763 Lja-Chr1 19945761 19949803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1763 2 589 Nodulin-like Gene Family AT5G14120 69.882 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1763 - - aprc:113861924 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1763 1 19945761 19949803 Lja1g1763 1 19945761 19949803 ECH