Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1762 ATGAGTGCGTTGCAGGAGAAGTTTGTGTCCTTGTACAAGAGCAGATGGCTGGTGTTTGTGGCTTCAATGTGGTTGCAATCATGGGGGAATGTTGGGTACTTATTTGGAAGCATATCACCTGTTATAAAAAGCTCCCTCAACTACAATCAGAAGCAGGTTGCCATGTTGGGAGTTGCCAAGGATCTTGGTGGCACTGTTGGGTACATCACTGGGATCTTGTGTGCGGTTTTGCCTATGTGGGGTGCTCTTCTTGTTGGTGCTGCTTTGGGCATTATTGGGTATGGTTGGGTCTGGATGATCGTTACTGCTCAAGTTCCTGCTCTCCCTTTATGGGCGATGTGTGTTCTTATATTTGTAGGAACAAATTTTGAAACCTACTGCAACACAGTTGCTCTGGTGTCTTGTGTGCAAAGTTTCCCCCAAAACAGGGGACCTGTGGTTGGAATTTTGAAGGGCTTTGGTGGTTTGAGCGGTGCCATCCTCATACAAATCTATTTAGTTTTCCATTCCCCAGATCCATCATCATTGATACTTATGGTTGCTGTTGGTCCACCATTGATAGCAATAGCTCTTATGTTCATTGTTAGACCAGTAGAAGGTCACAAACAGGTGAAGCCTTCAGATGGCAAAAACTTCACATTTGTCTATGGTGTGTGTCTCCTATTGGCTGCTTATTTGATTGGTGTCATGGTTGTCCAAGATTTAGTTGATCTGAGTCAAGCTGTTACCACAGTGTTCACAGTGATCCTCATTTTGATCCTCATTGTCCCAATTGTGATTCCTATCTCATTGAGTTTCGGCCCGGAACAAAAACCTCTAGAGGAAGAGGAAGAATCACTTCTTCCAGAATCACCTAGTAATGTACCAGGAAAATCTCAACTGATGGATATTGATGATGATGAATTGGGGGTTAAGAAGAGAAGAGGAGGAAAACAAAGAGGGGAAGATTTTACCTTGACACAAGCCTTGGTTAATGCAGATTTTTGGCTTCTTTTCATTTCAACTGTCTTTGGTGGTGGATCTGGGTTGACTGTGATTGACAATCTTGGTCAGATGAGCCAGTCTCTTGGATATGACAATGCTCATATATTTGTCTCCTTGATTGGTATTTGGAGCTTTCTTGGCCGTGTTGGAGGGGGTTACATATCAGAGATTGTCGTGAGGAATGTTGTGTATCCAAGACCAGCTGCATTGGCTGTGTTTCAACTTGTTATGATTGTTGGGCATCTTATCATTGGTATGGGATGGCCAGGGGCATTGTATGTTGGCACTTTACTAGTTGGGCTTGGTTATGGGGCTCATTGGGCAATTGTTCCTGCTACTGCCTCTGAGTTGTTTGGTTTGAGAAATTTTGGTGCATTGTACAATTTCATTACTCTAGCAAACCCTGCAGGAACTCTCATCTTCTCTAGTCTCATTGCCAGTAGAATATATGATTATGAAGCAGAGAAACAAGCTCATATAGGATCACTTGCATTGCGCATGCTTAATGTTGGTGAGCCACTAAAGTGTGAGGGTTACATATGCTTTTTCTTGACTTCAATTATCATGGCAGGGTCCTGCCTTATTGCAGCTGGCCTATGCATGATTGTTGTATTCCGAACAAGGATTGTTTATGCCAAATTGTATGAAAAATCTTCTACTAGTAGGCTTCAATAG 1659 0.4286 MSALQEKFVSLYKSRWLVFVASMWLQSWGNVGYLFGSISPVIKSSLNYNQKQVAMLGVAKDLGGTVGYITGILCAVLPMWGALLVGAALGIIGYGWVWMIVTAQVPALPLWAMCVLIFVGTNFETYCNTVALVSCVQSFPQNRGPVVGILKGFGGLSGAILIQIYLVFHSPDPSSLILMVAVGPPLIAIALMFIVRPVEGHKQVKPSDGKNFTFVYGVCLLLAAYLIGVMVVQDLVDLSQAVTTVFTVILILILIVPIVIPISLSFGPEQKPLEEEEESLLPESPSNVPGKSQLMDIDDDELGVKKRRGGKQRGEDFTLTQALVNADFWLLFISTVFGGGSGLTVIDNLGQMSQSLGYDNAHIFVSLIGIWSFLGRVGGGYISEIVVRNVVYPRPAALAVFQLVMIVGHLIIGMGWPGALYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLIFSSLIASRIYDYEAEKQAHIGSLALRMLNVGEPLKCEGYICFFLTSIIMAGSCLIAAGLCMIVVFRTRIVYAKLYEKSSTSRLQ* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1762 552 SUPERFAMILY MFS general substrate transporter 8 197 IPR036259 -
Lja1g1762 552 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 304 546 - -
Lja1g1762 552 Pfam Nodulin-like 15 262 IPR010658 -
Lja1g1762 552 Gene3D MFS general substrate transporter like domains 208 532 IPR036259 -
Lja1g1762 552 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 286 - -
Lja1g1762 552 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 304 546 - -
Lja1g1762 552 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 286 - -
Lja1g1762 552 SUPERFAMILY MFS general substrate transporter 213 536 IPR036259 -
Lja1g1762 552 CDD MFS_Mch1p_like 14 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1762 Lja-Chr1 19899960 19903690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1762 2 548 Nodulin-like Gene Family AT5G14120 60.825 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1762 - - aprc:113861924 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1762 1 19899960 19903690 Lja1g1762 1 19899960 19903690 ECH