Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1751 ATGGAGAATAACAATAATTATTCCATGCTGTTTCCTTGTCCTTCTTCTTCCACAAGTGTTGTGGGAAGTTCTCACAATGGTTATAGTGGTTTGAATAATGATCACCAATTTGAGAAGAGAGTGGAAGATGCTAGAGATGGCATATTGTCACAGATTAATGTGAGTGATAACAAAAAGAAAGGGGAGAAAAAGGCTAGAAAGCCAAGATATGCTTTTCAAACGAGGAGCCAAGTTGATATTCTTGATGATGGCTATCGATGGAGGAAATATGGCCAAAAAGCTGTTAAGAACAACAAATTCCCCAGGAGCTACTACAGGTGCACGCATCACGGGTGCAATGTGAAGAAGCAAGTGCAACGCCTAACCAAAGACGAAGGGGTAGTGGTGACAACTTATGAAGGAGTGCACACTCACCCAATTGAGAAGACAACTGATAACTTTGAACACATTTTGAATCAGATGCAAATATACACTCCATTTTGA 483 0.4017 MENNNNYSMLFPCPSSSTSVVGSSHNGYSGLNNDHQFEKRVEDARDGILSQINVSDNKKKGEKKARKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHHGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILNQMQIYTPF* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1751 160 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 156 IPR044810 GO:0003700
Lja1g1751 160 SMART WRKY_cls 81 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g1751 160 ProSiteProfiles WRKY domain profile. 76 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g1751 160 Pfam WRKY DNA -binding domain 82 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g1751 160 Gene3D WRKY domain 58 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g1751 160 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 53 156 - -
Lja1g1751 160 SUPERFAMILY WRKY DNA-binding domain 73 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1751 Lja-Chr1 19634591 19638089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1751 69 160 WRKY Transcription Factor Family AT5G13080 88.043 1.07e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja1g1751 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1751 - - ccaj:109792402 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1751 1 19634591 19638089 Lja1g1751 1 19634591 19638089 ECH