LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g1685	ATGAAGGAGGTGAGGGAGGCAGCTCACCATGGAGGAGTTGGAGATTACGGTGGAGCACTCCCTAATCCTGTGACAGTTTCAAGCTGGGAATTCAATTTGTTACCGTTGAAGTGTTTGATCGCAAACTCCTATAAATCAATTTCATTTCACAAGCAATTTATGAAGTTTGAAGTAACTAGTCTCCTCTCTCTGTCACCCTGTGTTTTCTCTCCGAAACGATCTCGGCTCGCCACCGTAGAGGAGCAATTCACCACCGCATTCATCTTCGTCATCCGGCATACTGCCCCTCTCTCCGGCGTCCGTCCGTCGTCTTGCAAAGAGAAGAGAGAGCCCGGAGCTAGAACCATTTCTTTGGTTTGTCGCAGAAAATCTTGTGCGTTCCGAATTTCTATCGCACTCATGCTCTTCTGCCCAAGATTCGTTCATCGGAGAAACCAAAGGCCCGTGATCTCCATTCCGCGTTCAAATGTTTGGTCCGCACACGGCAACGGTGGAAGAAGGCGCGAGTCGCGTGACCAACGGTGGAAAAACGCACCGGCTGCTGATGGTCAGCATCTGATTCTTCATCCTCTGAACATGAAGTGTCTACTTCACCATTATGGGAGCTATGATACGCTTCCTCACAGAATAAGTGGAAGGATTCTGCAATTGGAGACAGTTACGCACTTTCTGAAATTGATTTGTGAGATATTGCCTCCTGAAGCACTGGCCCTATTTATGGATGAAATAAATAAGCGCTCTAATCTGAGGAAACAACTTGTAAAGAAGAATATCAATGATAAACTGATTTCTGCCAAAAAGAAAAAACTGATTCTCACCAAATAA	825	0.4594	MKEVREAAHHGGVGDYGGALPNPVTVSSWEFNLLPLKCLIANSYKSISFHKQFMKFEVTSLLSLSPCVFSPKRSRLATVEEQFTTAFIFVIRHTAPLSGVRPSSCKEKREPGARTISLVCRRKSCAFRISIALMLFCPRFVHRRNQRPVISIPRSNVWSAHGNGGRRRESRDQRWKNAPAADGQHLILHPLNMKCLLHHYGSYDTLPHRISGRILQLETVTHFLKLICEILPPEALALFMDEINKRSNLRKQLVKKNINDKLISAKKKKLILTK*	275

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g1685	274	PANTHER	RING FINGER 10 FAMILY MEMBER	180	261	IPR039739	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g1685	Lja-Chr1	18580002	18587400	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja1g1685	180	262	C3H Transcription Factor Family	AT3G26730	47.619	1.03e-20	89.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g1685	-		-	lja:Lj1g3v3904340.1	180.644