Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1678 ATGGAAAAGAGCAGCGAAGACGACGCTGCAGAAATCGAGACGGTGGAGTTCGCCGCATCGGAGATCGAGTACGTCAGTTACGGCGGCGAGCACCACCTCCCTCTCGTCATGAACCTCGTCGACCAAGAGCTCAGTGAACCTTACTCCATCTTCACGTACCGTTACTTCGTCTATCTCTGGCCTCAGCTTTCTTTCCTGGCTTTCCACAAGGGGAAATGTGTAGGCACGGTGGTGTGTAAGATGGGGGAGCACCGTAACACTTTCAGAGGCTACATTGCAATGCTGGTTGTGATCAAACCCTATAGAGGAAAAGGAATTGCGACGGAGCTTGTTACTAGGTCTATTCAGGTGATGATGGAATCAGGTTGTGAAGAGGTTACATTGGAAGCGGAAGTTACAAATAAAGGAGCACTGGCACTGTATGGTCGCCTTGGCTTTATTAGGGCCAAGCGGCTCTTTCACTACTACTTGAATGGAGTTGATGCTTTCCGTCTGAAACTTCTATTTCCCCGCCCAGAGTTGCACCCAACAACTCACCATATCAGATAA 549 0.4954 MEKSSEDDAAEIETVEFAASEIEYVSYGGEHHLPLVMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGEHRNTFRGYIAMLVVIKPYRGKGIATELVTRSIQVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLLFPRPELHPTTHHIR* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1678 182 Pfam Acetyltransferase (GNAT) family 57 146 IPR000182 GO:0016407
Lja1g1678 182 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 8 169 IPR044542 GO:0004596|GO:0017196
Lja1g1678 182 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 30 170 IPR016181 -
Lja1g1678 182 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 20 170 IPR000182 GO:0016407
Lja1g1678 182 CDD NAT_SF 64 129 - -
Lja1g1678 182 Gene3D - 29 180 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja1g1678 Acetyltransf_1 6.7e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1678 K00670 - gmx:100806790 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1678 1 18516140 18519009 Lja1g1678 1 18516140 18519009 ECH