Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1636 ATGGGATCCTCTTGCCAAGAATCTTCACCACTTGAAGACATGAAGGTGACCATCCACGAAACCTCAATGGTTTTTCCATCCAAAGAAACCGAGAAGAAGCCCTTGTTCTTGTCAAACATAGACAAGGTCCTTAATTTCGATGTGGACACGGTTCACTTCTTCGCCGCGAACGAGGATTTCCCTCCGGAGATCGCGACGGAGAGGTTCAAGAATGCGCTAGCTGATGCTTTGGTGGCTTATGACTTCTTGGCCGGAAGATTGAAGGTGAACTCCGAAACCAGCAGGTTGGAGGTGGATTGCAATGCGGAGGGGGTGGGGCTTGTAGTGGCTTCTAGCAAATACAAGTTGGATCAGATTGGGGACTTGGCTTATCCTAATCCAGCTTTTGCACAGTTTGTTCACACGACTAAGGATTTCACTAAACCTGGTGATATTCCATTATGTGTTGTCCAGGTAACATCCTTCGAATGTGGAGGCTTTGCAATTGGTTTCACAACCAGCCACACCACCTTTGACGGCCTCAGCTTCAAAACTTTCTTGGACAACCTCGCTGCACTGGCTGCTAACAAGCCCCTGGCCGTGACACCCTGCCACGACAGGCACCTCCTCGCCGCCCGATCCCCGCCACGCATCAGCTTCCCCCACCCGGAGTTGATCAACCTTGAAAGCCTTGACTCTGGAGTCTTCGGAGCCTCCACAGAAAAACTTATCTTCAATGTCTTCCGCCTAACCTCCGACAACATCACCGCACTCAAGGAGAAAGCAAAGAGTACTAACAGCGCCACACGTGTCACGGGTTTCAATGCGGTCACCGCGCTTTTGTGGAAATGCAAGGCTCTCTCAGGACCTCAGGATCCTGAAAGATCGTCTACTATTTTATACGCGGTGGATATACGTCCACGGTTGAACCCTCCGCTCCCGAAATCTTACACCGGGAACGCGGTTTTAACCGCGTACGCCACCGCGAAGTGTGGTGAATTGGAGGAGGGTTCGTTTTCGAGATTGGTGGAGATGGTTGGTGAGGGTGCTGGGAGAATGAGTGATGAGTACGCGAGGTCGGTTATAGATTGGGGGGAGTTGTATAACGGATTTCCCAATGGGGAGGTTTTGGTTTCGTCTTGGTGGCGGTTGGGGTTTGAGGAGGTGGAGTATCCGTGGGGGAAGCCAAAGTATTGTTGTCCGGTGGTGCATCATAGGAAGGATATTATATTGGTGTTTCCTCCTCTTCGCGAGGGTAGCGGCGGTGGCAGTGACAGTGGTGATGGTGTGAGTGTTATTGTTGCTCTGCCTCCAGAGGACATGGAGAAGTTTCAGAGTATTTTTTACACGTTCTTGAGCTGA 1341 0.5101 MGSSCQESSPLEDMKVTIHETSMVFPSKETEKKPLFLSNIDKVLNFDVDTVHFFAANEDFPPEIATERFKNALADALVAYDFLAGRLKVNSETSRLEVDCNAEGVGLVVASSKYKLDQIGDLAYPNPAFAQFVHTTKDFTKPGDIPLCVVQVTSFECGGFAIGFTTSHTTFDGLSFKTFLDNLAALAANKPLAVTPCHDRHLLAARSPPRISFPHPELINLESLDSGVFGASTEKLIFNVFRLTSDNITALKEKAKSTNSATRVTGFNAVTALLWKCKALSGPQDPERSSTILYAVDIRPRLNPPLPKSYTGNAVLTAYATAKCGELEEGSFSRLVEMVGEGAGRMSDEYARSVIDWGELYNGFPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVHHRKDIILVFPPLREGSGGGSDSGDGVSVIVALPPEDMEKFQSIFYTFLS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1636 446 Pfam Transferase family 14 442 - -
Lja1g1636 446 Gene3D - 12 219 IPR023213 -
Lja1g1636 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 443 - -
Lja1g1636 446 Gene3D - 230 444 IPR023213 -
Lja1g1636 446 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 12 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1636 Lja-Chr1 17871898 17876628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1636 14 442 Monolignol Biosynthesis Gene Families AT5G48930 30.905 8.90e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1636 K13065 K15400 gmx:100780971 661.759