Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1603 ATGGCTTCCGAAACCGTGATAAGCCCTGAGACAGTATCGAAAGCCGTCACCTCCCTCCTCAAATGGCGAAAATCCCAATCGGAGACGCAAAAACCCAACCTCTTAGGCCCAGACGAGGAGTTCGTGTACCTCGTTCTCACCCTGAAGAAGGTCCCTCAAAAGGGTCGCGTGAACCCTCACAAGCTTCCCCTCCCTCACTCCCTCCACTCCGATTTCTCCCAGCACTGCCTCATCCTCGACGACCGCGCCAACAAGGGCCGTGTCACCAAGGCGGACGCGCAGGCCAAGATCAAGGCCGAGTCCATCCCCATTGCCAAGGTCCTCAAGCTCTCCAAGCTCGCTTCTGATTACCGCCCCTTTGAGGCCAAGCGGAAGCTCTGTGACTCCTATGATCTGTTTTTCACCGACAAGGCGGTCGTTCCGTTGCTCGCCCGCCTTCTCGGGAAGCAGTTTTTCAAGAAGCGTAAGGTGCCTGTGCCGCTGGATTTGACTAAGAAGAACTGGAAGGAGCAGGTGGAGAAGGCGTGCTCGTCGGCGATGATGTTTTTGAGGACCGGGACGTGTAGTGTGGTGAGGGTTGCGAAGGTGAGCATGGAGAAGGATGAGATTGTGGAGAATGTGGTTGCGGCGGTTCGTGCTGCAGTTGAGCTTGTTCCGAAGAAGTGGGGGAATGTGAGGTCGTTGCATGTTAAGATGTTGGATTCTCTGTCTTTGCCGATTTATCTGGCTGTTCCTGATGTGAGGTTGAAGATTGATGGAGGGAAAGCTGAGGCGGAAGCGAAGGAGAAGGATAGTGTGAAGGAGAAGAAGAAGAGTGGTGAGGATGGGGATAGGGAAGTGGGGAAGAAGAATAAGAAGGGGAGGATTCATCAAGTTAAGTACATGGATGTGGATGCGGCGTCAGGGAGCAAGGATGAGGATGGTGACAATGCTGTGACCGAAGATGATGCTGAAAGGAGTGATGGAGGAGTGGAAAAATTGGGGAGTAAGAAGAGGAAGAAAGGAAGCAAAGTGGGGAAAGAGTCTGCTAAGTTGACTAGTGTGAAAACATTGGGGGAACCTGAAACTCCTAAGGAAGGGGTCAAGAGGAGGAAAAATAAAGATGGGTCGTCTACCAAAGTGACAAAGAAAGGTTTGATCAAGAAGGGTGGAGATAAATTGCATGCTAAAAAGGAGGGGTCCAGTGAGAAGAAGAAGAAGTTGAAAGGAGCTGATGCGAAGGTTAAGGCGAAGAAAATTAAGAAGGCGGCGGCATGA 1257 0.5163 MASETVISPETVSKAVTSLLKWRKSQSETQKPNLLGPDEEFVYLVLTLKKVPQKGRVNPHKLPLPHSLHSDFSQHCLILDDRANKGRVTKADAQAKIKAESIPIAKVLKLSKLASDYRPFEAKRKLCDSYDLFFTDKAVVPLLARLLGKQFFKKRKVPVPLDLTKKNWKEQVEKACSSAMMFLRTGTCSVVRVAKVSMEKDEIVENVVAAVRAAVELVPKKWGNVRSLHVKMLDSLSLPIYLAVPDVRLKIDGGKAEAEAKEKDSVKEKKKSGEDGDREVGKKNKKGRIHQVKYMDVDAASGSKDEDGDNAVTEDDAERSDGGVEKLGSKKRKKGSKVGKESAKLTSVKTLGEPETPKEGVKRRKNKDGSSTKVTKKGLIKKGGDKLHAKKEGSSEKKKKLKGADAKVKAKKIKKAAA* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1603 418 MobiDBLite consensus disorder prediction 256 418 - -
Lja1g1603 418 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 300 - -
Lja1g1603 418 MobiDBLite consensus disorder prediction 355 403 - -
Lja1g1603 418 Pfam Ribosomal protein L1p/L10e family 19 235 IPR028364 -
Lja1g1603 418 MobiDBLite consensus disorder prediction 315 329 - -
Lja1g1603 418 CDD Ribosomal_L1 12 240 IPR028364 -
Lja1g1603 418 SUPERFAMILY Ribosomal protein L1 14 241 IPR023674 -
Lja1g1603 418 Gene3D - 87 178 IPR016095 -
Lja1g1603 418 MobiDBLite consensus disorder prediction 256 284 - -
Lja1g1603 418 MobiDBLite consensus disorder prediction 404 418 - -
Lja1g1603 418 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 7 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1603 Lja-Chr1 17364245 17365501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1603 129 231 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 5.97e-08 51.2