Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1575 ATGAATTCCTCAGCTCAGGTCTGTTACAACAAGACTACGTTCTACAGCCACTCCATTTGGGTGGAAAATTCTTTAGAAAACACACTACCAACCTTTGTTCTGCAATTTGGCGTTGTTCTAGCATTCAATCGCATTCTCCTACTTGTGGCAGAATTATGCCATATACCTGGTATTGTTGTCAATATTTTGACTGGTGTTTTATTAGGACCCTCTGTCATGGGGCGTTGGGATTCTTTCTTCCAAAACATCTTCCCTTACAGGAACATGTTGACATTGGAGACCATAGGGGCAGTGTCCCTTGTTTACTACGTGTTCTTGGTTGGGTTAGAGGTGGACTTGAAACCAATAACAAGGTGTTACAACAAGAAAGCCATGGTTGTTGCCACTGCTGGAACAATCTTCACCTTACCAATAGGGTTTGGCTTGTACTACCTTCTCATCACCGATATGGGACACACAGCACATACAGAAAAAATTAAACACATCAAGGGTGCAGTTTTATGGGGAGCCACCCTTTCTTGCAGCAGTGAGTTCCCAGAGATTGCCAAATTCCTTTCGGAGATGAAGCTTCTGCTAACAGAGAATGGACAACTAGCTTTAACTTCTTCTCTGGTTAATGACTTGTTTTCATGGACACTACTTCTGATGGCTGTAATTCAATCTTCTTACACTTCTCTGTTATCATTGATCCTCACCCTCGTGACAGTGACAGGGTTCTGTTTTGTGATTCATCCCGTTGCTAAGAGGATCATCAACAAGGTTGGAACCGGGGATCGTGAGTTTGTTGAGTCACAGGTGCTGCTTCTGTTGCATGTAGTTTTGGTTGTGGGATTCTTGTTTGATGGGTTGGGTGCGCAATCTGCGACTGGGGCTTTCTTTTTAGGAGTTGTGATCCCAAAGGGTCCGCTGAACAATGCCGTTCAGGACAAGGTGTTTGATTTTGTGTCTACGTTCATGATGCCACTCTTTTTCCTCTGCATTGGGGAGAGAGTCCAGATTGAAAGCATAGGCTTGGGAATACATTGGTACACCCTGGTGGTTGTTCTTGTGCTCGCCATCATGGCGAAGATAGTGTGTGTTTTCGTGGTGTCTTGTATCTACCAGATGCCGCTAATGGAAGGATTTTCCCTTGCACTTCTCATGAACATGAAAGGAACGTTGCCATTAGTCATTCTGATTTCCGGCAGGGACATGCTTGATCTGGATAACCAAACCTTTGTGGTTATGTTATTGGCGTGTTGGTTAATGACAGCAATTGCGGGGCCTTTATTGGCTTTGGCTACAGAAATAATTTCGAGGAGCAAACCTCTCACCGGCCAACAGAAGAACAGGCAATGCACTAGGCCAGACTCACCGCTTAGAGTGTTAGCCTGCGTCCACACAAAAAGTGACGCCAACGCCATCATCAACCTTCTCAAAGCATCATGTCCATCAGTGAGATCCCCAATTCAGGTGTTAGCAGTGGAGTTGATAAAGATGTCAAACCGCCCTGCTTCATCCCTCATCATAAAGGATGCTCGCAAGCCATCCTTCACCTCGAGATCCAGCTTTAACAAAGTCAAAGTCGGCGCCGGCGCTACGGACAACCTCGACAGCTTTGACAACCTCAGCCAGGCCATCTTCTCGGAGAAGCTTCGGATCATCTCCCAATTCAGCTCCATGCACAAGGACATCATCCACCTCTCACAGCGCCGAGGCTTCACCCTCATCCTCACCACCCTCTACAAGCAACCCACCTACGACGGCCTAGGCGCCGGCACCGCCACCGCAAGGGCCATCAACATCATCAACCGCGACCGCGCCAGCAAGGACGAGAAGAAAGTGGTCATGGAAAGTCTCATTAAGGAAGCACCATGTTGTGTTGCCTTGTTAGTAGATAGGAGATTTGGCCAGAAACGCGACAGGGAGAAGAGAATTGCCATGTTCTATGTCGGTGGTGTTGACGACCGTGAAGCTCTTTCTTACGCATGGAGGATGAGTGGGAACATGGAAGTTCAGTTAACAGTGGTGAGGCTCGTGTGGGAAAATCCTAAAGATGAGTTTGATGACAATGACAGGGAGTATTTGAGGGAGTTTGTGCAGAGAGGGGCAAACACGCCGAGGGTGAGGTATTTGGAGAAGACAGTGAGGAATGAGAAGGAGACGGTGAGGCTTCTGAACAAGGTCGCAAACAAAGGGTTTGATTTGTTCGTTGTGGGGAGAGGACATGGGAGGAAGATGTCACTGGCGCAAACAGAGGAACCAGTGTTGGAGGAACCGGCTCTAGGTCCTCTTGGGGATGCTTTGGCGGATTTAAACTCCGCTACTGAGACTTCCATTTTGATATTGCAGAGAAAAGCTGTTGACAATGGAGGTGATTTGGGGAAACATGAGCGATCTTTGTCTGTGACAGATGCTTTTCTAGAGCACCAAATGATGTTTCCTCCATCAACATATCCACCAGTTGCTTTTGGTCACTATACTTGA 2466 0.4716 MNSSAQVCYNKTTFYSHSIWVENSLENTLPTFVLQFGVVLAFNRILLLVAELCHIPGIVVNILTGVLLGPSVMGRWDSFFQNIFPYRNMLTLETIGAVSLVYYVFLVGLEVDLKPITRCYNKKAMVVATAGTIFTLPIGFGLYYLLITDMGHTAHTEKIKHIKGAVLWGATLSCSSEFPEIAKFLSEMKLLLTENGQLALTSSLVNDLFSWTLLLMAVIQSSYTSLLSLILTLVTVTGFCFVIHPVAKRIINKVGTGDREFVESQVLLLLHVVLVVGFLFDGLGAQSATGAFFLGVVIPKGPLNNAVQDKVFDFVSTFMMPLFFLCIGERVQIESIGLGIHWYTLVVVLVLAIMAKIVCVFVVSCIYQMPLMEGFSLALLMNMKGTLPLVILISGRDMLDLDNQTFVVMLLACWLMTAIAGPLLALATEIISRSKPLTGQQKNRQCTRPDSPLRVLACVHTKSDANAIINLLKASCPSVRSPIQVLAVELIKMSNRPASSLIIKDARKPSFTSRSSFNKVKVGAGATDNLDSFDNLSQAIFSEKLRIISQFSSMHKDIIHLSQRRGFTLILTTLYKQPTYDGLGAGTATARAINIINRDRASKDEKKVVMESLIKEAPCCVALLVDRRFGQKRDREKRIAMFYVGGVDDREALSYAWRMSGNMEVQLTVVRLVWENPKDEFDDNDREYLREFVQRGANTPRVRYLEKTVRNEKETVRLLNKVANKGFDLFVVGRGHGRKMSLAQTEEPVLEEPALGPLGDALADLNSATETSILILQRKAVDNGGDLGKHERSLSVTDAFLEHQMMFPPSTYPPVAFGHYT* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1575 821 PANTHER CATION/H + ANTIPORTER 5 786 - -
Lja1g1575 821 PANTHER CATION/H+ EXCHANGER 3 5 786 - -
Lja1g1575 821 Pfam Sodium/hydrogen exchanger family 45 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja1g1575 821 Gene3D - 558 750 - -
Lja1g1575 821 Gene3D - 30 436 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1575 Lja-Chr1 17105696 17108767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1575 7 778 Antiporter Super Family AT2G13620 32.756 2.28e-131 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1575 - - aprc:113862236 1023.85