Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1573 ATGATCAGCATCCAAATCCAATCTTGCCACACCATCCTCCCCTTTGAACCCACCCCCAATGAAAAACTCTACTCCTTGTGCGAACAAATCAAGCTCCGCACCCACGCTCCGCTCCTCTATGTGTACAAGCCACTTAACCACAAAAATACATCAACCTTCCTTCACACCCTCATCAAGTCTCTCAGCCAAACTTTAGTTATATACTACCCACTAGCAGGGAGATTGAGTTGGCTCCATGGAGGAAGATGGGAACATCATTGCAACACGAAGGGAGCACAACTCTTACTAGCCAAATGCGAAGAACAAGCAACCTTAGATGATTTGGGTGATTTCGCACCAACCTATTTGGTGTTACCACTCATCCCCAACATTGATTATGATGTTCCTATTGATGACATTCCTCTTTTGGCGGTGCAATTAACAAACTTATGTTGTCGCGGTTTTACATTGGGAGTGGCGTTCAGTGGCGCCGTGGTTGATGGACCAGCATCCATGCGTTTCATGAACACATGGGCCAAGCGGGCACGAGGGGAGTGTTTGGACCCATCAGAAATGCCATGCCACGATCGAACCGTGCTAAAATCACGAAAGTCTAATCATTTGGATGCGGGTAGACATCATGAGTTCCACGCGCCTCCTGCTTGGGTAGGCGATTTTCGAGAAGCCGATAAAGTTGTTGCTATGAAAGCTAGCTCCTCCAGAGCTATGTCGACAAGACATAAAGCTTATTCAAGTTTTGAGGTTGTTGCGGGCTACCTTTGGAGATGCGTGAGCAAAGCACGCTATGCGGGATACGACGAACAACCCACGAGGCTATCAACATTGGTTAATTCTAGAAACCGGTTGAGGCCACCTCTCCCTGGTGGTTATGCAGGGAACGTAGCGTTTCCAACCGTCACACCAACGCGCTCGTTTGCTGAAATCATCCATAATCCTTTGAGTTATGCGGTGGAGAATGTCCAGGAAGCGCTTGAAAGGGTTAATGGGGAGTTCGTGGGGTCATCACTTGATTACATTGCTAAGGAGAAGGATATTGAATCAGTGAGGTATAGTTTTCACTACCATGCGCCGAGTGTGCATAAGGGATCTTCTAAAGGGAACCCGAACCTTTTTGTTGTGAGTTGGTTGAGTTTCTCGTTTAAGGCTGCTGATTTTGGGTGCGGGGAGCTTATTTTTTTTGGGCCTGGGTACTTGGATTCTGAAGGAAAGGCTTTCCTTATGAATGATGCTAGTGGTGATGGCCTCGTTGTGGCTATTTGTTTGGAAGCAACTCACATGGACGCTTTCAGGAAATTGATTTATGATGACATTGAAGAATTGTTTCTCTCTTCCAATTTGTGA 1341 0.4661 MISIQIQSCHTILPFEPTPNEKLYSLCEQIKLRTHAPLLYVYKPLNHKNTSTFLHTLIKSLSQTLVIYYPLAGRLSWLHGGRWEHHCNTKGAQLLLAKCEEQATLDDLGDFAPTYLVLPLIPNIDYDVPIDDIPLLAVQLTNLCCRGFTLGVAFSGAVVDGPASMRFMNTWAKRARGECLDPSEMPCHDRTVLKSRKSNHLDAGRHHEFHAPPAWVGDFREADKVVAMKASSSRAMSTRHKAYSSFEVVAGYLWRCVSKARYAGYDEQPTRLSTLVNSRNRLRPPLPGGYAGNVAFPTVTPTRSFAEIIHNPLSYAVENVQEALERVNGEFVGSSLDYIAKEKDIESVRYSFHYHAPSVHKGSSKGNPNLFVVSWLSFSFKAADFGCGELIFFGPGYLDSEGKAFLMNDASGDGLVVAICLEATHMDAFRKLIYDDIEELFLSSNL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1573 446 Pfam Transferase family 3 432 - -
Lja1g1573 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 442 - -
Lja1g1573 446 Gene3D - 220 436 IPR023213 -
Lja1g1573 446 Gene3D - 1 211 IPR023213 -
Lja1g1573 446 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 6 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1573 Lja-Chr1 17094867 17096246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1573 2 435 Monolignol Biosynthesis Gene Families AT5G48930 34.581 4.71e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1573 K13065 - gmx:100775549 546.584