LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g1545	ATGGCTGAGCCACAAGTTAGTAACAGTAGTGACCATGCCACTTCTTCTAGTTCTGGAGCTAGGCGTAAAGGCACGGTTTCAAAGCGTGGTGGCATGACAATAACAACAACAACAGCTCAGGGAGGTGCTCCATGTGGGGCCTGCAAGTTCCTGAGGAGGAAGTGTATCAATGGGTGCGTGTTTGCACCTTACTTTGGTTCAGACCAGGGTGCGGCACGGTTTGCGGTTGTGCACAAGGTGTTTGGTGCGAGCAATGTGTCGAAGCTACTGCTGCATGTTCCGGTGAACCGCCGCCATGAGGCGGTTGCTACTATATCGTACGAGGCTCAGGCGAGGTTGTCTGATCCTGTTTATGGTTGTGTGTCCACCATTCTTGCTTTGCAGCAACAGGTGGCATCTTTGCAAGGGGAGCTTTCTATGGTGCAAACTCAGCTGATGAATAGCAGGTTTGCATATGCAAGTGTTCTTCAGCAACAACAGCAACCAAACATCAATGTAGCAATGCACCCAGCGTACTCCAACAACTCATCTGCCTCCACCAACATTATGAACATGAGCTGCTTCAACCCTGCAGGATTTGACCTTTCAATGGAGACAGCAGCACCCTCCTCACACAGCTTCGAGCCTCTTCAACTCTCTCACTTGTCCCATGATGAGGAAGATGATTAA	669	0.5007	MAEPQVSNSSDHATSSSSGARRKGTVSKRGGMTITTTTAQGGAPCGACKFLRRKCINGCVFAPYFGSDQGAARFAVVHKVFGASNVSKLLLHVPVNRRHEAVATISYEAQARLSDPVYGCVSTILALQQQVASLQGELSMVQTQLMNSRFAYASVLQQQQQPNINVAMHPAYSNNSSASTNIMNMSCFNPAGFDLSMETAAPSSHSFEPLQLSHLSHDEEDD*	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g1545	222	MobiDBLite	consensus disorder prediction	1	32	-	-
	Lja1g1545	222	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 20	12	210	-	-
	Lja1g1545	222	ProSiteProfiles	LOB domain profile.	43	145	IPR004883	-
	Lja1g1545	222	Pfam	Lateral organ boundaries (LOB) domain	44	142	IPR004883	-
	Lja1g1545	222	PANTHER	LOB DOMAIN CONTAINING PROTEIN	12	210	-	-
	Lja1g1545	222	Coils	Coil	124	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g1545	Lja-Chr1	16745848	16746780	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja1g1545	17	222	AS2 family	AT3G03760	55.085	3.21e-74	224

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Lja1g1545		LOB	1.7e-37	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g1545	-		-	aprc:113866578	285.804