Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1534 ATGGCAGCTTTCATCTCTGAGTTAAAGCTTCAATCCAGAAAACTCATTGTTTTCCTCAACATATCTTTCATCTTCCTCCTCTGTCTCCTTCTAAAAGCTTACCTCCATCCACCAAACTCAAATTTTCATGGCCAGCCCAACAATGTTCCCCTCACAACCATCTTCAACCATGCTAGGTTGCTTAGTGATGTTACTCTTGATGGCTGCACTGACCTCCATAAGTATTCAGATTACACTTCTAAGTGCTCATATGTCAAAAGCCATCTTGATTGCAGGTCAAAAGGGTACATAAACTATATTCTAATCTTCTATTGCAATCTAGGCCAGTCCCCAATTTTAGGACATGTTCTCCTTGCCTTGTGGCTTGTGGTTTTGTTCTATCTTTTAGGTGACACAGCTTCCAATTACTTCTGCAATTCCTTAGAAGGATTGTCCAACATCTTGAGGCTCTCTCCCACTATTGCTGGGGTAACCCTGCTTTCTCTGGGAAATGGGGCTCCAGATTTTTTTGCAAGCATGGTTTCCTTCACAGGATCTAACAGCAATGGTGAAGTTGGTCTTAACAGCATTCTTGGAGGGGCTTTTTTTGTGTCTTGCCCTGTCTTGGGGATTATAAGCATTCTGATTAGCACAAAAGATGTTGCAGTTGATAAGGCCAGTTTCATCAGGGATGTACTTTTCTTCCTTTTCTCTCTGCTCACCCTCCTCATCATCTTTTCCATTGGTAAAATCACCTTGTTTGGTTCAATCTGCTATGTTTCTCTTTACTTCCTTTATGTCTGTGCTGTCTCAGCTACACATCTTTTCTATGGTGGAGATACTATAGAAAGGGAATTCAAAGTCATGTCTTTGGATGAGTTACTAGAGTCTGGCAATGGCATACCACTGTTAGGCTATGTTGATGATGAGAAAGAGAAACCAAATTTGGCAGAAAAAGTGGTTGTTGAAGATATGGAGGAAATGCCAGAATGTATTTACTTGGGGAAGTTTCTACAATTACTAGAGTTACCTCTTTGGTTACCAAGAAGGCTTACTATACCAGTGGTTAGTGAGGACAAGTGGTCTAAGCCATATGCTGTTATATCTGTCACATTAGCACCAGTTTTGTTGGCTGCACTTTGCAATGTCCAGAGGGAAAGATTAGGTTCAAGGAACAGTCTTGTTATGTACTTGGTAACTGCTTTGATTGGCATAGTTTTGGGGAATATGGCATGTGTGACTACAAAGAGATGTAGCCCACCAAAAAAGTCATTGTTTCCATGGCTAGCAGGGGGTTTTGCTATGAGCATAACATGGACTTATATTCTTGCTCAGGAGCTGGTTTCCCTGTTGGTTTCAATAGGGAACATCATTGGGATTAGCCCTTCAATCCTAGGGTTAACTGTCCTAGCTTGGGGTAACTCTCTTGGTGATTTGATAGCCAATGGTGCCATGGCTCTGAATGGTGGGGCAGCTGGGGCCCAAATGGCTGTTTCTGGTTGCTATGCTGGGCCCATGTTTAACACTTTGATGGGCTTAGGCTTTCCTCTTGTTCTCTCTGCATGGTCTGAACATCCAGAGCCTTATGTCATTCCTAAGGATAATTCTCTCTATCAAACCATTCTGTTCTTGATGGGAGGGGTGCTTTGGGCACTTGTGATATTGCCAAAGAAGAATATGAGGCTGGATAAAGCATTGGGAGCAGGGCTCTTGAGTGTGTACCTGTGCTTTCTGTTTATAAGGATAGCCATGGCTATTGGTTTTCTGAAAGTCTAG 1755 0.4245 MAAFISELKLQSRKLIVFLNISFIFLLCLLLKAYLHPPNSNFHGQPNNVPLTTIFNHARLLSDVTLDGCTDLHKYSDYTSKCSYVKSHLDCRSKGYINYILIFYCNLGQSPILGHVLLALWLVVLFYLLGDTASNYFCNSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASMVSFTGSNSNGEVGLNSILGGAFFVSCPVLGIISILISTKDVAVDKASFIRDVLFFLFSLLTLLIIFSIGKITLFGSICYVSLYFLYVCAVSATHLFYGGDTIEREFKVMSLDELLESGNGIPLLGYVDDEKEKPNLAEKVVVEDMEEMPECIYLGKFLQLLELPLWLPRRLTIPVVSEDKWSKPYAVISVTLAPVLLAALCNVQRERLGSRNSLVMYLVTALIGIVLGNMACVTTKRCSPPKKSLFPWLAGGFAMSITWTYILAQELVSLLVSIGNIIGISPSILGLTVLAWGNSLGDLIANGAMALNGGAAGAQMAVSGCYAGPMFNTLMGLGFPLVLSAWSEHPEPYVIPKDNSLYQTILFLMGGVLWALVILPKKNMRLDKALGAGLLSVYLCFLFIRIAMAIGFLKV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1534 584 Gene3D - 150 284 IPR044880 -
Lja1g1534 584 Gene3D - 358 576 IPR044880 -
Lja1g1534 584 Pfam Sodium/calcium exchanger protein 119 262 IPR004837 GO:0016021|GO:0055085
Lja1g1534 584 Pfam Sodium/calcium exchanger protein 422 575 IPR004837 GO:0016021|GO:0055085
Lja1g1534 584 PANTHER CATION/CALCIUM EXCHANGER 1 6 584 - -
Lja1g1534 584 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1534 Lja-Chr1 16622440 16624663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1534 67 583 Antiporters AT5G17860 53.728 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1534 K13754 - gmx:100819204 830.091