Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1533 ATGTCTACAACTACCACAACTACTACAACTACAACCACAGTTTCTCTTTCCAAAAGAATGGGTGGTTTCAGTTTCACAGTGTTCTTCAACACCTCGTTTGTCTTTTTGTTGTGTGTTTGTTTTATAGTTCATTTCAAGTACTCTTCAGAACATGCTGTTTTGAAGAGCAACAACAACAACCGGTTTGGTTTTGGTGTTGAACAATCTTGTAAGAGCTTCCTGAGCCTGAGTTATGAAGCTAAGTGCTTGTACATGAAATCCAACAACAATAATCCATGTGTTTCTCAGGGCTATGTTGATTACCTTTACCTTTTCTATTGCAAATTTGGGGGGTTTCCTATATTGGGTCATTTTCTGTTGTTGCTCTGGCTATTGGTTCTGTTTTATCTGCTGGCAAACACTGCTTCTGATTATTTTTGTCCTTCCCTTGAACATTTGTCTAAGTTGCTGAGGCTATCCCCTGCTATTGCTGGAGTGACCCTTCTATCTCTTGGCAATGGTGCTTGTGATGTTTTTGCCACCCTTGTTTCTTTTGAGGGTAGTGATGATACCCGGGGGATTGGGTTTAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCATGTGTTGTGGTGGGGATTATGAGCATTTGTGTTCGCCATAGAGGGATTCGGGTTACGAAATCTGCCTTGGTGAGAGATGTGTGTTTTCTTCTCTTGGTTCTTCTAGGCTTGTTCACCATTTTGATCACTGGGGAGGTCAATGTTGTTGGGGCAATTGGTTTCTGCTTGTTGTATGTGGTCTATGTGATAGTTGTTTATGTCTCATCTTCCCCAAGGAAAGGTGTCTGTGGGGATGCTGAAACTGAAAGTGATGACAATTCAAGTAATGGCAACAATTTAAGTGCTCCTCTGCTCAGTGGGATGGAGAAAGGACTAATTGATTCTGATGCAAATGGAGCTCAGGAATGTTGCTTGAAAATTGAGAACAAATGCTGCTGTGTGAAATCTTCAATATGTAGAAGGTTACTTTTTGTCTTGGAGATGCCCCTTTACTTGCCTAGGAGATTGACAATACCTGTTGTATGTGAAGAGAGGTGGTCCAAACCCTATGCAGTTTCTTCAGCTATACTAGCACCACTTTTATTGTCTTCCTTGTGGATCCCAGACAAGGAAACCAGTTTTTTTAATTCCAACTCAAGCCTAATAGTTTGTGGAATTGGGTTATTGGTTGGAATTATATTAGGGGTAACTGCATTTTTCACAACAGAAGTGTCAAATCCACCTAGAAAATACTTGTTTCCTTGGCTTGTTGGAGGGTTTGTGATGAGTGTGGCATGGAGCTACATTTCAGCTCAGGAATTGGTGGGGTTGTTGGTTTCACTTGGTCACATATGTGGAATAAGTCCTTCAATATTGGGGTTAACAGTTCTTGCTTGGGGAAATTCACTTGGGGATTTGGTGACTAATTTGACAATGGCTTTGAAGGGTGGTCCAGAAGGTGCTCAAATAGCAATATCAGGTTGTTATGCTGGCCCTATCTTCAATATAGTGGTTGGGTTGGGCTTATCTCTTGTGAGCTCTTCTTGGTCTGAATACCCTTCATCTGTTGTGATCCCTAGAGATCCTTACCTGTGGGAGACATTGGCACTTTTGGTGGCTGGATTGGTTTGGGCACTTGTGGTTCTGATTAGGAGGGATATGAAGCTTGATGCAGTCCTTGGAGGAGGGCTTCTAGTTGTTTACTTCATTTCTCTGTTTCTAAGGCTGGTTCAGACACTTGGATCTCTCCAATTTCAGGATATGTTAGTCTTATAG 1794 0.4197 MSTTTTTTTTTTTVSLSKRMGGFSFTVFFNTSFVFLLCVCFIVHFKYSSEHAVLKSNNNNRFGFGVEQSCKSFLSLSYEAKCLYMKSNNNNPCVSQGYVDYLYLFYCKFGGFPILGHFLLLLWLLVLFYLLANTASDYFCPSLEHLSKLLRLSPAIAGVTLLSLGNGACDVFATLVSFEGSDDTRGIGFNTVLGGASFVSCVVVGIMSICVRHRGIRVTKSALVRDVCFLLLVLLGLFTILITGEVNVVGAIGFCLLYVVYVIVVYVSSSPRKGVCGDAETESDDNSSNGNNLSAPLLSGMEKGLIDSDANGAQECCLKIENKCCCVKSSICRRLLFVLEMPLYLPRRLTIPVVCEERWSKPYAVSSAILAPLLLSSLWIPDKETSFFNSNSSLIVCGIGLLVGIILGVTAFFTTEVSNPPRKYLFPWLVGGFVMSVAWSYISAQELVGLLVSLGHICGISPSILGLTVLAWGNSLGDLVTNLTMALKGGPEGAQIAISGCYAGPIFNIVVGLGLSLVSSSWSEYPSSVVIPRDPYLWETLALLVAGLVWALVVLIRRDMKLDAVLGGGLLVVYFISLFLRLVQTLGSLQFQDMLVL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1533 597 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 13 590 - -
Lja1g1533 597 Pfam Sodium/calcium exchanger protein 429 582 IPR004837 GO:0016021|GO:0055085
Lja1g1533 597 Pfam Sodium/calcium exchanger protein 121 266 IPR004837 GO:0016021|GO:0055085
Lja1g1533 597 Gene3D - 152 277 IPR044880 -
Lja1g1533 597 Gene3D - 367 583 IPR044880 -
Lja1g1533 597 PANTHER CATION CALCIUM EXCHANGER 13 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1533 Lja-Chr1 16602466 16604968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1533 22 590 Antiporters AT5G17850 50.432 9.25e-159 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1533 K13754 - gmx:100787016 737.258