Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1524 ATGCCCAAAATGGAGTTCATCACCATTCTAATGCTCATCTTCCTCTACCCCTTTGCATTAGGTGAACTCAGGGTTGGATTCTATAATTCCACCTGCCCCAAAGCAGAGGACATTGTGCATGATGTTGTTCAGAGGACATTCAACCAGGATAGAACCATCACCGGCGCCTTGCTTCGCTTGCACTTCCATGATTGCTTTGTCAAGGGGTGTGATGCGTCCATATTAATAGATTCAACAAAGGGCACCAAATCAGAGAAAGAAGCAGGACCAAACAGAACTGTTCGGGGATATGAACTCATAGATGAGGCCAAAACAATCCTCGAAAAAACATGTCCTTCAACGGTCTCGTGTGCAGACATCATAACACTCGCCACACGAGACTCAGTGGCACTAGCAGGTGGGCCCAGATACACTATAGCCACAGGAAGGCATGATGGGCTCACATCCAAATCCTCCGATGTGGACCTTCCAGGCCCGGACCTCTCTGTCTCAAAGGTGCTGCAAGCGTTCACCGCAAAGGGCATGAATGTTAGAGAAATGGTGACCCTTTTGGGGGCCCACACCGTCGGGTTCACCCACTGTAGCTTCGTGAAAGGGAGGCTCTCGGACCCGAACATGGACTCGGATTTGCAGGCCGGGTTGGGAAAGTTTTGCGGTGGGAAGAACGACACGACAGTGTTTTTGGATCAAAGGACGGGTTTTGTGTTTGACAACGAGTTCTTTGGCCAAATGATGAAGCAGAGAGGGGTGCTTACCCTGGATCAGAACCTAGCTTTGGATCCTTCCACGAGGGGTGTGGTGTCGGAGTTTGCGGAGAATGCGGCGAGTTTTCGGGAGAGCTTTGTTGATGCGATGGTCAAGCTTGGAAGGACTGGTGTTTTGCTAGGGAATCAAGGAGAGGTTAGGAGAAATTGCAGAGTTTTTAACAAAATGAGTGTAGAATGA 945 0.4952 MPKMEFITILMLIFLYPFALGELRVGFYNSTCPKAEDIVHDVVQRTFNQDRTITGALLRLHFHDCFVKGCDASILIDSTKGTKSEKEAGPNRTVRGYELIDEAKTILEKTCPSTVSCADIITLATRDSVALAGGPRYTIATGRHDGLTSKSSDVDLPGPDLSVSKVLQAFTAKGMNVREMVTLLGAHTVGFTHCSFVKGRLSDPNMDSDLQAGLGKFCGGKNDTTVFLDQRTGFVFDNEFFGQMMKQRGVLTLDQNLALDPSTRGVVSEFAENAASFRESFVDAMVKLGRTGVLLGNQGEVRRNCRVFNKMSVE* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1524 314 SUPERFAMILY Heme-dependent peroxidases 22 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 Gene3D Peroxidase, domain 2 157 288 - -
Lja1g1524 314 CDD secretory_peroxidase 22 308 IPR033905 GO:0004601|GO:0042744
Lja1g1524 314 Gene3D - 27 309 - -
Lja1g1524 314 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 Pfam Peroxidase 40 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Lja1g1524 314 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 243 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Lja1g1524 314 PANTHER PEROXIDASE 44-RELATED 14 308 - -
Lja1g1524 314 ProSiteProfiles Plant heme peroxidase family profile. 22 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g1524 314 PANTHER PEROXIDASE 25-RELATED 14 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1524 Lja-Chr1 16518916 16521262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1524 3 309 Peroxidase AT4G26010 56.129 5.28e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1524 K00430 - gmx:100820340 402.905