Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1490 ATGGAAGGAGAAAATGGAAGGAAGCTGAAAATATTGTGCCTCCATGGATTCAGAACCAGTGGGAGTTTTCTGAAAAAGCAAATCAGCAAATGGGATCCTTCTATTTTCTCTCAATTTGATTTGGAATTCCCAGATGGTAAATTCCCTGCTGGTGGGAAATCTGACATAGAAGGCATCTTCCCTCCACCTTACTTTGAGTGGTTTCAATTCAACAAGGAATTCACAGAATACACTAACTTGGATGAATGCATCTCATACTTGTGTGAATACATCACCGCCAATGGCCCTTTTGATGGTTTCCTTGGCTTCTCACAGGGCGCAACACTTTCAGCACTTCTAATAGGCTATCAAGCACAGGGGAAGTTGCTGAAGGAGCATCCACCCATTAAGTTTTTTGTATCAATATCAGGTTCCAAATTCAGAGATCCCACGATATGTAATGTTGCATACAAGGACCCCATCAAAGCTAAGTCTGTTCACTTCATTGGTGAGAAAGATTGGTTGAAACTTCCTTCTGAGGAGCTTGCCTCTGCATTTCATAAATCCCTTCTAATAAGGCATCCACAAGGTCACACTGTCCCACGTTTAGATGAAGTTTCCACCGGTCAGTTGCGGGATTGGGTTGCAGGAATCCTTGGTGAACCAAAAGATGGTGAACCAAAAGATGGTGTCCCAATTGGTGAGCATGAAACACGCCATGAAGAAAAGAAATCAGAGGAGAAAGGGAGCAAGGTAGAAGTTAATAGTACCAATGGAGACAAAGAGGTAAATGGAGTGGAAATAAACAAGGGGGGTGCTGAGACAGTAGAGGTGGCCCAAGCCTGA 825 0.4339 MEGENGRKLKILCLHGFRTSGSFLKKQISKWDPSIFSQFDLEFPDGKFPAGGKSDIEGIFPPPYFEWFQFNKEFTEYTNLDECISYLCEYITANGPFDGFLGFSQGATLSALLIGYQAQGKLLKEHPPIKFFVSISGSKFRDPTICNVAYKDPIKAKSVHFIGEKDWLKLPSEELASAFHKSLLIRHPQGHTVPRLDEVSTGQLRDWVAGILGEPKDGEPKDGVPIGEHETRHEEKKSEEKGSKVEVNSTNGDKEVNGVEINKGGAETVEVAQA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1490 274 Pfam Serine hydrolase (FSH1) 7 198 IPR005645 -
Lja1g1490 274 PANTHER ESTERASE OVCA2 2 239 - -
Lja1g1490 274 PANTHER OS07G0687100 PROTEIN 2 239 - -
Lja1g1490 274 MobiDBLite consensus disorder prediction 212 274 - -
Lja1g1490 274 MobiDBLite consensus disorder prediction 215 248 - -
Lja1g1490 274 SUPERFAMILY alpha/beta-Hydrolases 5 194 IPR029058 -
Lja1g1490 274 Gene3D alpha/beta hydrolase 5 212 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1490 Lja-Chr1 16083919 16086016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1490 7 194 Sulfurtransferasese or Rhodanese AT1G09280 28.507 7.17e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1490 - - gmx:100780431 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1490 1 16083919 16086016 Lja1g1490 1 16083919 16086016 ECH