Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1478 ATGGGATCTCAAGGTGGAACAATCCAAGAGGCAAAGAATGGGCCATTGGCTAGGCAAGGGTCTTTGTACAATCTTACTCTTGATGAGGTGCAAAACCAGCTTGGGAATTTGGGGAAACCCCTGGGAAGCATGAATCTGGATGAGCTTCTCAAGAGTGTGTGGTCTGTAGAAGCTGGTCAGGCCTCTGGGTTGGATTCTGGCACTGATGCTTACATGCAACATGGTCAGGTAGCTTCTGGTTCATCTATGATTCCACAGGGGGGCCTAACAATGTCTGGGGAACTTAGTAAGAAAACTATTGATGAGGTTTGGAAGGATATGCAACAGAAGAAGGGTGCTAATCATGATAGGAAAACTCAAGATAGACAAGTTACACTGGGTGAGATGACCCTGGAGGATTTCCTAGTGAAGGCTGGGGTGGCTGGTGAATCTTTTCCTACTGAGGATAATGCAACATCAGTGGTTGATTCACAGCAGAATGCGTCTCAGCAGGCTCATTGGATGCAATACCAGCTCCCTTCAGTGCAGCAGCAGCAGCCCCCACAACAACAGCATCAAAATCCGCAGAACAATATGATGACGGGGTTTGCAGGATATATGGCTGGTCATGTGGTTCAGCAGCCTCTCGCGGTTGCGGTGAACCCAGTTTTAGATGCAGGATACTCTGAAGCAATGGTGACTGTGTCACCATCTTCTTTAATGGGTACCTTATCAGAGTCACAAACTCCGAGTAGGAAAAGGGTTGCCTCTGGTATTGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGCTCACGGGCTAGAAAACAGGCTTACACACAAGAACTGGAAATTAAAGTTTCACGTTTAGAAGAAGAGAATGAGAGGCTTAGAAGACAACATGAGATAGAACAAGTATTGCCAAGTGTGCCACCACCTGACCCTAAGCACCAGCTTCGAAGAACGAGTTCATCTCCGCTTTGA 993 0.4703 MGSQGGTIQEAKNGPLARQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWSVEAGQASGLDSGTDAYMQHGQVASGSSMIPQGGLTMSGELSKKTIDEVWKDMQQKKGANHDRKTQDRQVTLGEMTLEDFLVKAGVAGESFPTEDNATSVVDSQQNASQQAHWMQYQLPSVQQQQPPQQQHQNPQNNMMTGFAGYMAGHVVQQPLAVAVNPVLDAGYSEAMVTVSPSSLMGTLSESQTPSRKRVASGIVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQHEIEQVLPSVPPPDPKHQLRRTSSSPL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1478 330 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 328 IPR043452 GO:0003700|GO:0045893
Lja1g1478 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 303 IPR004827 GO:0003700|GO:0006355
Lja1g1478 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Lja1g1478 330 Coils Coil 276 310 - -
Lja1g1478 330 MobiDBLite consensus disorder prediction 305 330 - -
Lja1g1478 330 SUPERFAMILY Leucine zipper domain 260 306 IPR046347 GO:0003700|GO:0006355
Lja1g1478 330 CDD bZIP_plant_BZIP46 260 305 - -
Lja1g1478 330 PANTHER BZIP TRANSCRIPTION FACTOR 2 328 - -
Lja1g1478 330 SMART brlzneu 256 324 IPR004827 GO:0003700|GO:0006355
Lja1g1478 330 Pfam bZIP transcription factor 260 303 IPR004827 GO:0003700|GO:0006355
Lja1g1478 330 Gene3D - 258 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1478 Lja-Chr1 15935942 15940200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1478 1 330 bZIP Transcription Factor Family AT3G56850 56.598 3.10e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g1478 bZIP_1 5.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1478 K14432 - gmx:100783666 425.631