Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1441 ATGGAAGGAGATAGTTGGTGTGGTAGTTTCTTCCAAAGGTCCAAACCTTACATAGCCATGATTTCTCTGCAATTCGGGTTCGCTGGCATGAACATAATCACCAAGGTTTCACTCAACCGTGGAATGAGCCACTATGTTCTTGTGGTTTATAGGCATGCTTTTGCTACTGCAGCAATTGCTCCCTTTGCACTTGTTCTTGAGAGAAAAGTGAGGCCTAGGATTACATTTGTCATGTTCATGCAAATGTTCGTGTTGGGTCTACTTGGGCCTGTGATTGATCAGAACTTATACTATGCGGGGTTGAAATTCACTTCTCCAACTTACTCATGTGCTTTAAGCAACGTGCTTCCTGCAATGACGTTTCTTATGGCAGTGATTTTCAGGATGGAGAAGGTGGACATTAGAAAAGTTAGATGCCAAGCAAAGGTGTTAGGAACTGGAGTTACAGTTGCTGGGGCCATGTTGATGACATTGTACAAAGGGAAAGTCATCAATTTTTTGGGGTCTCAGTACATGCATCATCCAAGAAACTATGAGCCAGTGAACACCAATGCTTCTGCTGAACAGGATTGGGTTAAGGGTTCTATTCTTCTCATAATTGCAACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACATTAAGGAAATACTCTGCTCAGCTCTCACTCACAGCAATAGTGTGTTTCTTGGGCACACTGCAATCAATTGCAGTTACCTTTGTCATGGAGCACAGTCCTTCTGTTTGGTCCATTGGCTGGGACATGAACCTGCTTGCCGCAGCCTATGCGGGTATAGTATCATCTGGAATTACCTACTATGTTCAAGGGATTGTGATGCAAAAGAAAGGGCCAGTTTTTGTCACTGCTTTCAGCCCTTTGATGATGGTCATAGTGGCCATCATGGGCACTTTCATTCTAGCAGAAAAAATCTATCTTGGAGGGATCCTTGGAGCTATTCTGATTGTAATAGGACTTTACCAAGTTCTATGGGGAAAACAGAAGGAGCAAGAAGAGGAAACAGTAGAGGTAGTCACTGAGGTGATGAAGTGCTGTGAAGAAAATGGGAGGATGGAAACTGTGATGGAAGAAAGTGTTGAAACAAATGACATTGAGAAGCAAAAGGGTGAAGATTGCAAAGAATTCAGGGTGGTTATTGGTGTTCCGAAAGCTTGA 1179 0.4334 MEGDSWCGSFFQRSKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPRITFVMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCALSNVLPAMTFLMAVIFRMEKVDIRKVRCQAKVLGTGVTVAGAMLMTLYKGKVINFLGSQYMHHPRNYEPVNTNASAEQDWVKGSILLIIATLAWASFFILQAVTLRKYSAQLSLTAIVCFLGTLQSIAVTFVMEHSPSVWSIGWDMNLLAAAYAGIVSSGITYYVQGIVMQKKGPVFVTAFSPLMMVIVAIMGTFILAEKIYLGGILGAILIVIGLYQVLWGKQKEQEEETVEVVTEVMKCCEENGRMETVMEESVETNDIEKQKGEDCKEFRVVIGVPKA* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1441 392 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Lja1g1441 392 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Lja1g1441 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 336 - -
Lja1g1441 392 PANTHER WAT1-RELATED PROTEIN 10 368 IPR030184 GO:0016021|GO:0022857
Lja1g1441 392 PANTHER WAT1-RELATED PROTEIN 10 368 - -
Lja1g1441 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1441 Lja-Chr1 15485148 15487249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1441 1 390 Nodulin-like Gene Family AT5G07050 62.374 1.03e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1441 - - gmx:100793545 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1441 1 15485148 15487249 Lja1g1441 1 15485148 15487249 ECH