Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1440 ATGGAGCTCTTCTCAACTCAATCCCTTCTCTTCTTCTTCTTCTTCTCCCTTCTCCTCTTCATCTACTTCTACCTTCAATCCCTCAGGCTCACCACAAATAACAAGACAGGATTCAAAATCTACCCTCTAATCGGCTGCATGCCGGAATTTCTCATGAACCGTCACCGCTTCCTCGACTGGTCCACCGAAGTCCTCCGTGACTGCCCCACCAACACCGCCGTCTTCGCCCGCCCCGGCAACGTCCACGGCGTCATAACCGCCAACCCCGCCATTGTGGAGCACATGCTCAAGACCAACTTCGAAAACTACCCAAAGGGCCAAAAATTCATCTTCCTCCTCGGAGACTTCCTCGGCACCGGAATCTTCAACTCCGATGGCGACCTCTGGATGATGCAGAGGAAAACCGCCAGCTACGAATTCAGCACCAAATCTCTCCGGAACTTCGTCATGGAAAACGCCACGGCGGAGATGAGAGGAAGGCTGTTCCCCATTCTCGCCAGAGCAGCGGAAACGAACAGGGTCCTCGATTTGCAGGACATTCTGGAGCGATTCGCGTTCGACAATGTCTGCAAGCTCGCGTTTAACGTCGACCCCGGTTGCCTCGGCGGCGACGGCACCGCCGGAGCCGAGTTCATGGCGGCGTTTGAAAACGCCACCATGCTCAGCCAGGGGAGGTTCATGGCGGCGCTGCCGATACTGTGGAAGCTGAATAGGCTCTTCAAATTGGGACCAGAACGGAGGCTGAGGGAGTCAATCTCCACCGTCCATGAGTTTGCAGATAAGATCATACGGTCCAGATTGGAAGAAGCAGTGGACCCCACCGGAAACAACCAGGATCTGCTCTCTCGCTTCATCGGAACAGAGAACTGCTCGCCGGAGTTTCTCCGCTACATCATCATCAGCTTCATCCTCGCTGGACGCGATACGACGTCGTCGGCGTTGAGTTGGTTCTTCTGGTTAATCTCTTCACGACCCGACGTGAGGGAGAAGATCCGAAACGAGATCAAAACGGTGCGTATTGGGAAAACGGAAACGGCGTCGTTTAGTTACGAGGAGTTGAAGGAGATGCATTACCTCCACGCGGCGATTTCCGAGACGATGAGGCTGTTTCCGCCGGTGCCGGTGGACACGAAGTCGTGCTCAAACGACGACGTTTTGCCAGACGGGACGAGGATGGGGAAGGGATGGTTTATATCTTATCATACCTACGCGATGGGGAGGATGGTGAGTGTGTGGGGGGAGGATTGTGAGGAGTTTCGGCCGGAGAGGTGGTTGGACGGCGGTGGTTTGTGGCGGAGTGAGAGTCCGTTTAAGTTTCCGGTGTTTCATGCGGGGCCCAGGATGTGTTTGGGGAAGGAGATGGCTTATATTCAGATGAAGTATATTGCTGCTTCGGTGATGGAGATGTTTGAGGTGGAGGCTTTGGAAAAGGACACGTGTCCTGAGCATGTTTTATCTTTGACTTTGAGGATGAAATGTGGGTTGCCTGTGAGGGTGAGGGTTTTGGTTTGA 1512 0.5403 MELFSTQSLLFFFFFSLLLFIYFYLQSLRLTTNNKTGFKIYPLIGCMPEFLMNRHRFLDWSTEVLRDCPTNTAVFARPGNVHGVITANPAIVEHMLKTNFENYPKGQKFIFLLGDFLGTGIFNSDGDLWMMQRKTASYEFSTKSLRNFVMENATAEMRGRLFPILARAAETNRVLDLQDILERFAFDNVCKLAFNVDPGCLGGDGTAGAEFMAAFENATMLSQGRFMAALPILWKLNRLFKLGPERRLRESISTVHEFADKIIRSRLEEAVDPTGNNQDLLSRFIGTENCSPEFLRYIIISFILAGRDTTSSALSWFFWLISSRPDVREKIRNEIKTVRIGKTETASFSYEELKEMHYLHAAISETMRLFPPVPVDTKSCSNDDVLPDGTRMGKGWFISYHTYAMGRMVSVWGEDCEEFRPERWLDGGGLWRSESPFKFPVFHAGPRMCLGKEMAYIQMKYIAASVMEMFEVEALEKDTCPEHVLSLTLRMKCGLPVRVRVLV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1440 503 Gene3D Cytochrome P450 19 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Lja1g1440 503 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 Pfam Cytochrome P450 40 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PANTHER OS01G0804400 PROTEIN 16 498 - -
Lja1g1440 503 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PANTHER CYTOCHROME P450 16 498 - -
Lja1g1440 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1440 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1440 Lja-Chr1 15424206 15425889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1440 31 500 Cytochrome P450 AT3G56630 59.494 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1440 - - gmx:100812147 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1440 1 15424206 15425889 Lja1g1440 1 15424206 15425889 ECH