Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1435 ATGTGTGTGTTCATTGGATTTTTTGCTCTGGAGTTGCAGAAATTTGGAAACATTCCAAATAAGTCATCGTTAGCAATTATTGAACATGCCAAGACCTGTGTGATAGATGATTACAAGCTTTACAGCTACCACACAATAGAGCAACCAATAATTCTGTTATTCAATTCCATCTTCAAACTTTTGGGAGTGACATTTGATTGCCAAAATTATTATTCACCAGAGACTCTCGCGCCAAGCGAGAAGCATTTGGTAGAAATAGTGAAGCAAGATGCATACAAAAACGTGAATAACTTGAAACCAATGGATGAAGCTATATTGAACTGCTTAAACCTAGAGGCATGTCTAAAATCAAGGCACTCAGTTGCTCCAGTTCAAGATCTGCAATATATTGATATCTCAGCATCACAAGGTATACATAATGGAACATGGCCAGGTTATGTTCAACCATTTATCTCTGCTTCATATATTGATGAAACAATGTATGATTCCCAAATCTATGCTGATCCAGTGCCAGAAGCAAGAGAAATACCACAAAACATTCTTGTGGATGATGAATTTTCCTTAGGAATGTACATAGAAGGGGATAATTGGCACTTCAATGGATCACATTTTCCACATATGCAATGTGGTTATCCAACACAGAATGAGAATTCAGAAAATGGCTTTTACTTTGGTTCTTGTGATGGAGCAGCATTTAGCAGCCATAACACTTTGCTGAATCATGCTATGGATATATCAAGAAGTGGGAAACCAAAAGTAGAGTGGTGCAAGATTCGAGCTGCGATCAAATGGGTCATATCAGTGAGAAAAGATGCAGCTGCTAGGAAGAATGCAATGTTGGTTTAA 846 0.3771 MCVFIGFFALELQKFGNIPNKSSLAIIEHAKTCVIDDYKLYSYHTIEQPIILLFNSIFKLLGVTFDCQNYYSPETLAPSEKHLVEIVKQDAYKNVNNLKPMDEAILNCLNLEACLKSRHSVAPVQDLQYIDISASQGIHNGTWPGYVQPFISASYIDETMYDSQIYADPVPEAREIPQNILVDDEFSLGMYIEGDNWHFNGSHFPHMQCGYPTQNENSENGFYFGSCDGAAFSSHNTLLNHAMDISRSGKPKVEWCKIRAAIKWVISVRKDAAARKNAMLV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1435 281 PANTHER CALMODULIN-BINDING PROTEIN 13 279 - -
Lja1g1435 281 Pfam Calmodulin binding protein C-terminal domain 39 99 IPR046829 -
Lja1g1435 281 PANTHER OS02G0177800 PROTEIN 13 279 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1435 Lja-Chr1 15356996 15358070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1435 27 276 Calmodulin-binding Proteins AT4G31000 24.231 5.34e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1435 - - pvu:PHAVU_001G226000g 311.997