Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1434 ATGGCACTGAAGAGGACATCTCAGGACAAGGGTCCGGTTGATGATGATGACAGGGATCTTCTGGTTCCTGGTAAGCGGAGAAGGGCCAACCCAGAACCAGAAGACGCCAGTCGGCACCTTTCGTTTCTTACTGGTGCCAGAAATGCCATGAATGACATTGCTTTCTACTTGGAACCTATTCTTCAAAAAGTGATACAAGAGATGATTCCACCTATGCTCCAGAGATACGTGTCCCCGTGTTCTTGTGCATTGACCCTTAACCAGAAAGCTGGCACATCTGGAGGGAGAGCTTTGCAATTCTGTTTTGTGAATCAATTGCCTGAAACAATTTTCACACAGTGCGATATCAAAGCTGAGGGAGGTCTTGCACTTCAAATTGAGCTCCGTGATGCTGCAAACCAGCAAAGCGTAGTCAAGGATGAAGGTTCCTCCATGAGGATCAGGATCTGTGTCCTGGATGGTGACTTTGGAAGTGAGGATTGGACTGCGGAGGAATTCAATGCCCAAATTTTGAGTCCGAGAGAGAGAAAAGGACCGTTACTTGTTGGAGACACGGTGATTACATTGAAAAATGGAGTTGGTTACATCAGTAAGAAGATGGTGTTTACTGATAACTCCAGTGGAACAAGAAGCGGAAAGTTCCGGTTAGGAGTTAAAATAGTGCAATCTAATTCCTCTAGAACAGACATCAGAGAAGGGAGGAGTGAACCCTTTAGGGTCTTGGATTACAGAGGAAAAGCTAACATGAAATATGACCGTCCATCATTGAATGCCGAGGTATGGCGTCTGAAGAAGATAACCAAAAATGGTGAACCTTGCAAGCAGCTGTCCTCAAATGGAATAAAAACTGTTAAGGATTTTCTGCGGTTGTACATAACCGATCAAGCTTCATTAAGAGAGAAAATAGGCAAGATCCCAGAGAAGCATTGGAATACAATTATTGAACATGCTAAAAATTCTGATAAAGATGATGATGAGCGCTACATTTATTCTGCAACTGAACAATCAATGTCCCTTGTCCTTAATTGTGTGTATGAGGTTGTGGAGGTGACTTTTGATGGACAAAATTATCGCCCTGTGCAATCTCTGAATTTGGAAGAGAAGCGTTTGGTGGAAAGAGCTAAAAAGCAAGCTTACAACAATTTGAAGAATCTGATGCCAGTTGGAACAACAAAACATGGCTCGGTGGAGACATCGGCAGGTGTACAAACTGCACAATATGGTGGTCCAGGTCATGGTCTGCAACAGTTTGAGGTTCCAATTGCTCAGCAAGGCCAAATAGAAACATGGTCTTTAGGTACAACATCACAGAGAGACCTGGTAGGTTCTAATCAGTTGGAAGCACTGGGAGAAACACCACCATATTGTTCTGCAGGTGGACAATTGATCTCTGGAGCATATACTGATGATAGAAACAGATCCCCCTTTGGTGAACCACACATGGATCAATTTATTGATTGCTTTCTCCTTGACCATTGGGAGCAAGTAAATCCTAACTACTCTTCAGCTTATGGTAGTGTAGGATCTAGCAATTATCAACCTTTCTCCAGTAATGGCTATCTGCCAAGAAATGGGTATATGCCAAGCAGAGGGAAGCGCAAGCAAATTTGGCAGAAGATTCGAAATGCTTTCAAATGTGTCGTACTGCATGTAGCTAAAAGAAAGGCACAAGTTTTCCACCATCAACATTAA 1692 0.4314 MALKRTSQDKGPVDDDDRDLLVPGKRRRANPEPEDASRHLSFLTGARNAMNDIAFYLEPILQKVIQEMIPPMLQRYVSPCSCALTLNQKAGTSGGRALQFCFVNQLPETIFTQCDIKAEGGLALQIELRDAANQQSVVKDEGSSMRIRICVLDGDFGSEDWTAEEFNAQILSPRERKGPLLVGDTVITLKNGVGYISKKMVFTDNSSGTRSGKFRLGVKIVQSNSSRTDIREGRSEPFRVLDYRGKANMKYDRPSLNAEVWRLKKITKNGEPCKQLSSNGIKTVKDFLRLYITDQASLREKIGKIPEKHWNTIIEHAKNSDKDDDERYIYSATEQSMSLVLNCVYEVVEVTFDGQNYRPVQSLNLEEKRLVERAKKQAYNNLKNLMPVGTTKHGSVETSAGVQTAQYGGPGHGLQQFEVPIAQQGQIETWSLGTTSQRDLVGSNQLEALGETPPYCSAGGQLISGAYTDDRNRSPFGEPHMDQFIDCFLLDHWEQVNPNYSSAYGSVGSSNYQPFSSNGYLPRNGYMPSRGKRKQIWQKIRNAFKCVVLHVAKRKAQVFHHQH* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1434 563 MobiDBLite consensus disorder prediction 1 35 - -
Lja1g1434 563 Pfam Calmodulin binding protein-like N-terminal domain 98 242 IPR046831 -
Lja1g1434 563 Pfam Calmodulin binding protein C-terminal domain 327 387 IPR046829 -
Lja1g1434 563 MobiDBLite consensus disorder prediction 1 37 - -
Lja1g1434 563 PANTHER CALMODULIN-BINDING PROTEIN 60 G 1 553 - -
Lja1g1434 563 Pfam Calmodulin binding protein central domain 256 319 IPR046830 -
Lja1g1434 563 PANTHER OS02G0177800 PROTEIN 1 553 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1434 Lja-Chr1 15352463 15356819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1434 37 388 Calmodulin-binding Proteins AT5G26920 37.709 1.03e-70 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1434 - - lja:Lj1g3v4083120.1 1127.85