Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1404 ATGGGACTCTGCCATGGAAAACCCATTGAAACCACAAGACATCATGAAGGTGCAGCAGCAAACCCAGAATTCCCAAATGCCAACGAGATTCTTCCACTGCCACCATCTACTCACAGCACAAAATCCTCCAAGTTTCAATTCTTCAGTCCAAGTCCCTTGCCGAGTTTCTTCAAGAACTCGCCGGCGAACTCCAGTGTGAGCTCAACGCCTCTACGCATCTTCAAGCGGCCGTTTCCGCCTCCTTCGCCGGCGAAGCATATCCGGGCCTTGCTGGCCCGGCGACATGGGTCGGTGAAGCCTAATGAGGCTTCTATCCCTGAAGGGAGTGAGTGTGAGGTTGGGTTGGATAAGAGCTTTGGATTCTCCAAGAACTTCTTGGCTCATTATGAGCTTGGACAGGAAGTGGGGCGTGGCCATTTTGGTTACACTTGTGCTGCCAAGGGGAAGAAGGGTAGCTTCAAGGGTCATGATGTTGCTGTCAAAGTCATTCCAAAATCTAAGATGACAACAGCAATTGCTATAGAGGATGTAAGGAGAGAAGTAAAGATATTGCGAGCTCTAACTGGGCATAAGAATCTGGTGCAATTCTATGAAGCCTATGAAGATGACGAAAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGGGAACTGCTGGATAAGATTCTTTCCAGGGGTGGAAAGTACTCGGAAGAGGATGCCAGAGTTGTTATGACTCAGATATTAAGTGTTGTAGCTTACTGTCACCTGCAAGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTCTTTGCTTCTGAGGATGAAAATTCCTCATTGAAGGCAATTGATTTTGGACTGTCTGACTATGTAAAGCCAGATGAGAGGTTAAATGATATTGTTGGAAGTGCATATTATGTTGCTCCTGAAGTTCTGCATAGATCTTATGGGACAGAAGGAGATATGTGGAGCATTGGTGTAATTGCTTATATACTTTTATGTGGAAGCCGACCTTTTTGGGCCAGGACAGAATCTGGCATATTCCGGGCTGTCTTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCGGCTGATGCGATAGATTTTGTAAAGAGGCTGTTGAATAAAGATTATCGGAAAAGACTAACTGCAGCTCAGGCTCTCAGTCATCCATGGCTGGTGAGTCACAGTGATGATATCAAAATACCCTTTGATATGATAATCCACAAGCTTGTTAAAGCATACATATGCTCATCTTCTTTACGCAAATCAGCGTTAGGGGCTCTTGCAAAGACATTAACATTAGTGCAGCTAGCATATCTCAGAGAACAATTTACTCTTCTGGGGCCAAACAAAAATGGATTAATCTCAATGCAGAACTTCAAAATGGCTATTTTAAGGAGCGCCACTGATGCCTCCAAGGATTCACGGGTCTTAGATTATGTGACCATGATTAGTTCAATCCAATATCGGAAATTGGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTCCATCAACTAGAAGGAATGGACACCTGGGAGCAACATGCAAGGCGTGCCTATGAGCTGTTTGAAAAGGATGGAAATAGACCAATTATGATTGAAGAGCTTGCCTCGGAACTTGGGCTTAGCCCATCAGTACCTATTCATGTGGTACTCCAAGACTGGATAAGACACTCAGATGGGAAGCTAAGTTTCTTGGGGTTTGTCAGACTCCTGCATGGAGTTTCTTCTCGCACATTTCAGAAGGCTTAA 1752 0.4435 MGLCHGKPIETTRHHEGAAANPEFPNANEILPLPPSTHSTKSSKFQFFSPSPLPSFFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKSFGFSKNFLAHYELGQEVGRGHFGYTCAAKGKKGSFKGHDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDENVYIVMELCKGGELLDKILSRGGKYSEEDARVVMTQILSVVAYCHLQGVVHRDLKPENFLFASEDENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEGDMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALSHPWLVSHSDDIKIPFDMIIHKLVKAYICSSSLRKSALGALAKTLTLVQLAYLREQFTLLGPNKNGLISMQNFKMAILRSATDASKDSRVLDYVTMISSIQYRKLDFEEFCAAAISVHQLEGMDTWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1404 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 34 578 - -
Lja1g1404 583 SUPERFAMILY Protein kinase-like (PK-like) 120 420 IPR011009 -
Lja1g1404 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Lja1g1404 583 SMART serkin_6 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g1404 583 PANTHER CDPK-RELATED KINASE 1 34 578 - -
Lja1g1404 583 Gene3D - 412 501 - -
Lja1g1404 583 Gene3D - 417 571 - -
Lja1g1404 583 Pfam Protein kinase domain 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g1404 583 ProSitePatterns Protein kinases ATP-binding region signature. 135 161 IPR017441 GO:0005524
Lja1g1404 583 Gene3D Phosphorylase Kinase; domain 1 122 218 - -
Lja1g1404 583 ProSiteProfiles Protein kinase domain profile. 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g1404 583 CDD STKc_CAMK 128 390 - -
Lja1g1404 583 SUPERFAMILY EF-hand 421 574 IPR011992 -
Lja1g1404 583 Gene3D Transferase(Phosphotransferase) domain 1 219 410 - -
Lja1g1404 583 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1404 Lja-Chr1 14951974 14958194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1404 1 581 EF-hand Containing Proteins AT3G50530 66.772 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lja1g1404 Pkinase 5.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1404 - - gmx:100803625 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1404 1 14951974 14958194 Lja1g1404 1 14951974 14958194 ECH