Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1385 ATGGGTAGTAGAAGTAGAACAGTTAATGCTAATAACACTGAGGACAGTAACAAGGTTGTGAACAGGATGCCAAGCTACGCTCCTCCTCCATTGCCTTCTACTTCTAGTTCCATGGGCATTGAAGCAACTAATGTTCATCCTTCTCGAATTTCTGAATTTGGAGCCCTCGAACAATCTCTTGGATTTCGTATTGAAGATACCATGAATCTTAGCAGAAATCCTGTGTTCAATCAAATGAAATCAAATAGCCAAGCTCTTGGTGCTGATATTCAGTTCGGTGCTTTGAGCAAGTCAATTGCAACCTCGGATAATAACCTCTCTGCTGCAATTGCGGGGTCTCAGATGATGCCATTACAGAAAGACTCGCAACCAAATCTGGCTTCAACATCTGGAGGTCATCGCGAAAACTGGGGCGAGTCCAACACGGGTGATGCGAGCCCTACATCAACAGATGATACAGATGATAAAAATCAAATGGTTGAAAGGGGTGAATCCAGTGATAGATCAAAAGATAAAACAGATCAAAAGACATTAAGACGGCTGGCTCAAAATCGTGAAGCTGCTAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAGTTAGAGAGTAGTAGGTTGAAACTTACACAACTGGAGCAAGAGCTCCAGCGAGCTCGCCAGCAGGGAATATTTATTTCAAGCACCGGAGAGCAGGCCCATTCAATGAGTGGAAATGGTGCTATAGCATTTGATGTTGAATATGCGCGATGGTTAGAAGAACATAATAGGCATACCAATGAGCTAAGGGCTGCTATCAATTCTCATGCTGGAGACATTGAACTTCGTACCATTGTTGACAATTTCATGACACAATTTGACGATCTCTTCAGGCTGAAAGGTATCGCTGCAAAAGCTGATGTTTTTCACATCCTGTCTGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCTTCAGAAATTCTCAAGCTTCTTGTAAATCAATTGGAGCCTTTAACTGAGCAACAATTGATGGGCATCTACAACTTGCAACAGTCATCCCAACAGGCCGAAGATGCTCTATCCCAGGGAATGGATGCATTGCAGCAATCACTATCTGAGACCTTGGCTAATGGTTCACCCAACCCATCAGGCTCTTCAGGAAATGTGGCCAACTACATGGGGCAAATGGCTATGGCGATGGGAAAGCTAGGTACCCTCGCTGGATTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACATTGCAACAAATGCTTAGGATATTAACAACTAGACAATCCGCTCGAGCCCTTCTCGCAATAAGTGATTATTTCTCCCGGCTGCGAGCCCTGAGTTCTCTCTGGCTGGCCAGGCCACGGGAGTGA 1386 0.4509 MGSRSRTVNANNTEDSNKVVNRMPSYAPPPLPSTSSSMGIEATNVHPSRISEFGALEQSLGFRIEDTMNLSRNPVFNQMKSNSQALGADIQFGALSKSIATSDNNLSAAIAGSQMMPLQKDSQPNLASTSGGHRENWGESNTGDASPTSTDDTDDKNQMVERGESSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQAHSMSGNGAIAFDVEYARWLEEHNRHTNELRAAINSHAGDIELRTIVDNFMTQFDDLFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSEILKLLVNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLAGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1385 461 SUPERFAMILY Leucine zipper domain 176 219 IPR046347 GO:0003700|GO:0006355
Lja1g1385 461 MobiDBLite consensus disorder prediction 1 20 - -
Lja1g1385 461 MobiDBLite consensus disorder prediction 149 178 - -
Lja1g1385 461 PANTHER TRANSCRIPTION FACTOR TGA9 64 461 - -
Lja1g1385 461 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Lja1g1385 461 Gene3D - 175 227 - -
Lja1g1385 461 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 64 461 - -
Lja1g1385 461 Pfam Seed dormancy control 258 333 IPR025422 GO:0006351|GO:0043565
Lja1g1385 461 MobiDBLite consensus disorder prediction 115 148 - -
Lja1g1385 461 MobiDBLite consensus disorder prediction 115 178 - -
Lja1g1385 461 Pfam bZIP transcription factor 176 216 IPR004827 GO:0003700|GO:0006355
Lja1g1385 461 ProSiteProfiles DOG1 domain profile. 241 458 IPR025422 GO:0006351|GO:0043565
Lja1g1385 461 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 218 IPR004827 GO:0003700|GO:0006355
Lja1g1385 461 SMART brlzneu 172 235 IPR004827 GO:0003700|GO:0006355
Lja1g1385 461 Coils Coil 195 222 - -
Lja1g1385 461 CDD bZIP_HBP1b-like 176 228 - -
Lja1g1385 461 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1385 Lja-Chr1 14734399 14741097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1385 140 461 bZIP Transcription Factor Family AT3G12250 73.636 1.53e-170 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g1385 DOG1 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1385 K14431 - gmx:778136 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1385 1 14734399 14741097 Lja1g1385 1 14734399 14741097 ECH