Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1382 ATGGCTAACAACAAGAACAAGGAGGCTGAGAAAGAGTTTTTCTTAGATCAGAGCAATGAGAATATTATTGAAGATGAAGAGGATATTGAAGCTCTCAAATATGAAAGTGGAAGCAGTAATGGTGGAGGTCGTAGTGACGATGAGGATAATCGTAAAACACAACCTCAATCTTTCTCTTCTCAGATATGGCCTCAAAGTTACAAAGAAGCAGTTGATTCTTACACAATATCTGCAGCTCCGACTCTGGGATCAGTTCTACAAGCACCTAGTATGATTTACGCAAGCTTCACTCGTTCAAAGAGTTATTTGGAACAAGAAGGAAAGATTTCTTTTCTATCTAGTCATGAAGTCAGTGGTCATATTCCAGAGGCGCTCTCAAGAAAACAATCAACATGGTGGGAAAAAGCTTCAATTCAAATGCATATTCCTGAAGAAATACCCGTTGGTTATGGATGCAGCTTCACTCAAACAATATTTAATGGGATTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCTTACACAGTGAGACAAGCTGGGTGGGCAAGTTTGGTGGTGATGATTCTTTTTGCACTTGTATGTTGTTATACAGCAGATCTTATGAGACACTGCTTTGAAAGCAGAGATGGGATCAACAGCTACCCTGATATAGGAGAAGCTGCATTTGGAAAATATGGCAGAGTTATTGTATCAATCATTTTGTACGTTGAATTATATTCATACTGTGTGGAATTCATTATCTTAGAAGGAGATAATCTCACTGGACTATTTCCCGGAACATCCTTGAGTTGGGGTAGTTTCCAATTGGATTCCAAGCACTTGTTTGGAATTTTGGCAGCACTGATTATTCTCCCAACTGTTTGGTTGAAGGACCTTCGTATAATCTCTTATCTCTCAGCTGGAGGGGTTGTTGCTACAGCTTTGATTACTATATGTGTGTTCGCAATTGGGACTAAAGATGATGTTGGATTTCATCACTCTGGCCCATTGGTGAATTGGAGTGGCATTCCATTTGCTTTTGGTATCTATGGGTTCTGCTTTGCAGGACATTCAGTTTTTCCAAATATTTACCAGTCTATGGCTAATAAAAGAGAATTTACCAAGGCAGTAATGACATGTTTTATTTTGTCCATGTTGATATATGGAAGTGTTGCAGTCTCTGGATTTCTCATGTTTGGTGAAGGGACTAAGTCACAAATAACATTGAATCTTCCACCAAATGCATTTGCATCTAAAATTGCCTTGTGGACAATAGTAATTAGCCCGTTGACTAAATATCCTTTTTTGTTTTCTTTATTAAACTCCAACATGGTTTGA 1320 0.3856 MANNKNKEAEKEFFLDQSNENIIEDEEDIEALKYESGSSNGGGRSDDEDNRKTQPQSFSSQIWPQSYKEAVDSYTISAAPTLGSVLQAPSMIYASFTRSKSYLEQEGKISFLSSHEVSGHIPEALSRKQSTWWEKASIQMHIPEEIPVGYGCSFTQTIFNGINVMAGVGLLSTPYTVRQAGWASLVVMILFALVCCYTADLMRHCFESRDGINSYPDIGEAAFGKYGRVIVSIILYVELYSYCVEFIILEGDNLTGLFPGTSLSWGSFQLDSKHLFGILAALIILPTVWLKDLRIISYLSAGGVVATALITICVFAIGTKDDVGFHHSGPLVNWSGIPFAFGIYGFCFAGHSVFPNIYQSMANKREFTKAVMTCFILSMLIYGSVAVSGFLMFGEGTKSQITLNLPPNAFASKIALWTIVISPLTKYPFLFSLLNSNMV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1382 439 Coils Coil 15 35 - -
Lja1g1382 439 MobiDBLite consensus disorder prediction 1 62 - -
Lja1g1382 439 Pfam Transmembrane amino acid transporter protein 153 434 IPR013057 -
Lja1g1382 439 MobiDBLite consensus disorder prediction 1 18 - -
Lja1g1382 439 PANTHER AMINO ACID TRANSPORTER AVT1A 40 435 - -
Lja1g1382 439 PANTHER OS05G0424000 PROTEIN-RELATED 40 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1382 Lja-Chr1 14702790 14706614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1382 56 434 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.089 2.22e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1382 K15015 - gmx:100790344 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1382 1 14702790 14706614 Lja1g1382 1 14702790 14706614 ECH