Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1348 ATGACCAATCAGAAGGTTGGAGCAGAGGATTCTGTTTCCATCCAGCAAGAAAACAGAGGAAAATTGGATTCCAAGAAGAAACTGAAGAAAGTGAGATCAATAAGGCTTCAAAGATTGTCCAAAGGAGGGAAACCCCAACATGATAATCTCTCAATTCTCTCATCTGTTACCACAGAAGGTTCAGAGGAGCAAACCCCAATTGAAATGGCAGATGCATCACCAAGTTACATGAAGGGTACTACAAGCAGTTCTCATGCAAAGGATGGTTTTCAGAGTTCACAAAGAGTTCTTACTTTGAAACTAAAGAGGAGTTTGACTAGAAAGTCATCAAGATCAATCAAGATTGCAACTTCAAAAGCACCAAAATCAACAAGAAAGCAATCTGAAACCCTTAATGGCAGTGATGCTGGTGGTGACAGATCCCAGAGAGTCATTACCAGAAGGTTGAGCCTGAAGCCTGTAAGATTCTTGACAAAAGTCCCCACTTTCAAATCAAGGAATTCTTCCATGGATAAAGGCCCTCAGAAGTCTAAATCCCTAGAAGGATCAAGGTTGAGTAAAGCCACCTGTTCTTCTGCTCTCAAGGATTCCCATTTCACTGATCACATTGATCTCCCAGAAGAGGGAACTGTTTCTCAAGGTGCATCAGCTATGAAGGTTTGTACATTTAGTTACTGCTCTCTTCATGGTCATCGCCACCACGATGATTCGCCTCCGGTGAAGCAATTTGTGTCGACGAGAAGGCGAATGTTGAAGGCACAAAAGTCCATGAAAATTGATGGCAGATCAAAGCAGTTTAGTAATGCTAGGAAATCCAATCAGAAAACCAAAACTGTTCAGAGTGAAGATGAAAAGAATGACAAGAATGTGAATGCATCCAAGAAAATTGATGAAAGTGCTACTATGGAATCAACAACAGATGCAGTCAAGTTGTCTGCTACTGATATTGAGATATTGGATGGCGGAGTAACTACAGAAGGCAAAAATATGGAGCCAGATTTTGAAGTACTGCAGATAAGTTCTGTAGAGGAAGATCCTATTAAAGTTCCTAGCACTACTGATGTGGAGCCAGATTGTGAAGTGCAGCAGATAAGTTCTGTAGAGGAAGATCCTACTAAAACTGCAAGCGCTACTGATGTGGCCAATGGAATTCAGGAAAGAGATCAGAAATATATGAAAATGTGGCGCATGATGTATAAGCATGCAGTACTAAGTAATGCAGGGAAATGTGAGAATAAGGTGCCTTTTGAAGGGAAGGAAAAGGAAGAAAGAGAGCTAGATGGTCCTGCGTTCGATGGAGTAAACAGCTCTTCTAGTCAGAGTAGTTGTGAAGCTGATCAGGACATGGATGAAGACAATAAGAATGTAATTGAACTTGTGCAGAAAGCATTTGATGAAATTCTTCTTCCTGAAGCTGAAGGCCTCTCTTCTGATGATAGTTTCAAACATAGAGGCACTGGATTGGACGAGGTAGTCCAAGAAAAGAGTGAAGGTGCTGGAGAAGAAAGGAATACATTGACATCAACTGAATCTCTTAAAGAAGAACAGACGATGGGAGCTAAACCTGATCAAAGAACACCCAAAAGCTGGAGCAATCTGAAAAAGATAATACTCTTGAGAAGGTTTGTAAAGGCATTGGAGAAGGTAAGAAACATCAATCTCAGAAGACCTAGACAATTGCCTTCAGATGCTAACTCGGAAGCAGAAAAAGTTTTTCTCAAGAACCAAACAGCAGAAGAGAGAAAAAGAGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTATATCGAAACTCGCACCGGCTCAAAGACAAAGAGTTACACTCTTAATAGAAGCTTTTGAAACAATTGTGCCATTTCAAGATACTGATGTTAGCCAGCAGTCTTCTGCAACAGTGGAGCCTCAAGCACATCCAATTCAATCCCTTGATGATTTCTCAGGTCATAGCAAAGAAGAAACAGATGAAGGAAAGGTTCATGATTTTTCTACTAAGATATTGCTCGGAAAAGAATCATGTTCTCTCAATAGTACTATGGAACTTTCAGATAATGAAATTCATAGTACAGTTCCTGAACTGCAAAATTCTATTGTGCTCAAAGAAAGATGTCTCGACTCTCCTGGAACCATTGAAGATGACTTCAGTGGAAAGCAAAATTTAGCCAGAAGTTTTGATGATGGGGAGAAGATCTCAATTGACAATGATAATATTTATCATGTAGAGATTGAAGATTCTGGATCACATTCCTTATGTAAGCCAGATGAAATTATAAACACCTCTCATGAGGAGACTCCAACCAATGAAATAGTCAATGAAGTTCCAGAAGATTTGATATCAAATTTGGACACAGAAAATTCAAATATCAAATCTGAGTCATCTGGAAGAGATGCTGAAACCAAGGATAAGATTGGTGATCATGTGGAACAGCTTTCTGTGTCCAAAAGTTTTATCCTGAATGGTCTTGTTAGATCACTCAGATCTAATTTGGTTGGTTCAGGATCATCTTCAAACCTGTTAGATGAACCTCCACACCTACAATCTGAAGCTCCTAAGAGTGCTGTTGCAGAACCTGAGACCCACCAAGAAAAACAAGGCTATAAAGGAATGTGGTACATGGTGTATAAGCACATGGTATCTGATATGGCTGAAAACAATTCCAGTTCAGTAATTGATGAGAAAGAGTCTGTGGATGAAGGGAGCAGAACTCAAGGAACTTCGGTCTCTTATGAAAACAAACCTGTGACTAATCAAGATATGCACTTCAAGGAGCAAGTAGCCGACCGGGACATAGAACTCCGACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATCCTTCCAGATGATCAGGACCAGTTACCGGACAGACAGCCTCTCACTGAAAGGATCAACAGCGAAGGTCTGAACCAAAAGGAAGAAACAATAGAACGCGGAAACAGAATAACCCGAGAAGAAAAGGAAGAACCAGCAGAAAAGGAGGGAAACAAACCAAACCAGCCAATGCATAGAAGTTGGAGCAATCTTAAAAAAGTGATCCTGCTCAGGAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCTAGATATCTACCTATAGAGCCTGATTCTGAAGCTGAAAAAGTTCTGTTAAGGCATCAAGACATGGAAGCAAGAAAAGGCCAAGAAGAATGGATGCTTGATTATGCGCTTCGACAGGTTGTTTCGAAACTAACCCCAGCTAGGAGAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACGGTCACACCAACCATAAAAAGCTGA 3312 0.4058 MTNQKVGAEDSVSIQQENRGKLDSKKKLKKVRSIRLQRLSKGGKPQHDNLSILSSVTTEGSEEQTPIEMADASPSYMKGTTSSSHAKDGFQSSQRVLTLKLKRSLTRKSSRSIKIATSKAPKSTRKQSETLNGSDAGGDRSQRVITRRLSLKPVRFLTKVPTFKSRNSSMDKGPQKSKSLEGSRLSKATCSSALKDSHFTDHIDLPEEGTVSQGASAMKVCTFSYCSLHGHRHHDDSPPVKQFVSTRRRMLKAQKSMKIDGRSKQFSNARKSNQKTKTVQSEDEKNDKNVNASKKIDESATMESTTDAVKLSATDIEILDGGVTTEGKNMEPDFEVLQISSVEEDPIKVPSTTDVEPDCEVQQISSVEEDPTKTASATDVANGIQERDQKYMKMWRMMYKHAVLSNAGKCENKVPFEGKEKEERELDGPAFDGVNSSSSQSSCEADQDMDEDNKNVIELVQKAFDEILLPEAEGLSSDDSFKHRGTGLDEVVQEKSEGAGEERNTLTSTESLKEEQTMGAKPDQRTPKSWSNLKKIILLRRFVKALEKVRNINLRRPRQLPSDANSEAEKVFLKNQTAEERKRAEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETIVPFQDTDVSQQSSATVEPQAHPIQSLDDFSGHSKEETDEGKVHDFSTKILLGKESCSLNSTMELSDNEIHSTVPELQNSIVLKERCLDSPGTIEDDFSGKQNLARSFDDGEKISIDNDNIYHVEIEDSGSHSLCKPDEIINTSHEETPTNEIVNEVPEDLISNLDTENSNIKSESSGRDAETKDKIGDHVEQLSVSKSFILNGLVRSLRSNLVGSGSSSNLLDEPPHLQSEAPKSAVAEPETHQEKQGYKGMWYMVYKHMVSDMAENNSSSVIDEKESVDEGSRTQGTSVSYENKPVTNQDMHFKEQVADRDIELRQIEAIKMVEEAIDSILPDDQDQLPDRQPLTERINSEGLNQKEETIERGNRITREEKEEPAEKEGNKPNQPMHRSWSNLKKVILLRRFIKALEKVRKFNPRGPRYLPIEPDSEAEKVLLRHQDMEARKGQEEWMLDYALRQVVSKLTPARRRKVELLVEAFETVTPTIKS* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1348 1103 MobiDBLite consensus disorder prediction 253 301 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 491 527 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 832 863 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 276 294 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 75 100 - -
Lja1g1348 1103 PANTHER CALMODULIN BINDING PROTEIN PICBP 12 1101 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 983 1007 - -
Lja1g1348 1103 SMART CaM_binding_2 510 620 IPR012417 GO:0005516
Lja1g1348 1103 SMART CaM_binding_2 979 1099 IPR012417 GO:0005516
Lja1g1348 1103 MobiDBLite consensus disorder prediction 260 275 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 1 18 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 983 1002 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 162 185 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 420 450 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 627 659 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 1 147 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 886 912 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 780 802 - -
Lja1g1348 1103 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 12 1101 IPR044681 GO:0005516
Lja1g1348 1103 MobiDBLite consensus disorder prediction 47 64 - -
Lja1g1348 1103 MobiDBLite consensus disorder prediction 110 139 - -
Lja1g1348 1103 Pfam Plant calmodulin-binding domain 995 1098 IPR012417 GO:0005516
Lja1g1348 1103 Pfam Plant calmodulin-binding domain 519 620 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1348 Lja-Chr1 14206083 14210594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1348 393 692 Calmodulin-binding Proteins AT5G04020 29.721 1.08e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1348 - - lja:Lj1g3v4192280.1 2087.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1348 1 14206083 14210594 Lja1g1348 1 14206083 14210594 ECH