Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1313 ATGGGAGATCGCTTGCGAAATGGGGTTCATGATTTCAACATGGCTTCGAGAAAAGCTGAAGAAGCAGCTTGGAGACGGTATGAGGCAACTCAGTGGCTAGAAAGTCAAGTGGGTCCTCTCGGCATATCGAACCAGCCTACGGAGAGAGAGCTCATTTCTTGCTTGAGAAATGGTCTTGTTCTTTGCAAAGCCATTAACAAGATTCATCAAGGAGCAGTGCCTAAGGTTGTTGATATTCCAGTAGCTTCACAAACATTTGGCTGGGACTCCCAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTTCGCAACTTCCTTGTTGCGGCCGAAGAATTAAAGCTTCCAGCTTTCGAAGCTTCTGATCTCGAAAGGGAGAGTGTGGAGATGGGATCGGCAGGGAAAGTTGTCGATTGCATTCTATCGCTTAAATTGTATCAAGAGTTGAAGCAGAATCAGAATGGATGCAACAAACACTTAAGATCTCCTTTACTTATGCACTCAGCCAGCAGAATGCATTCAAAGGCCACAGCTGCAGTCGCCTCCGATGCATGTAGGCGCTTGGATTTGTCTGCCACAACAGAAAAAACTCCTGTTGAGAGTAATCTTCCAAAACGAGAAGCAGAAATTGTGGAATCACTTGTCAAGCTACTTGTTGACCGTATGCTTGAGGCCAAAGAAAACATTGGTGGAAACATGATTGCTTCTCTTCGTAATGAAGACCTGGATCCACTAAAGCTATTAAATCAGATCATGATCAGTTGTGGGGAACAGCCAACTTCAAAGTTCCCTGAGAACTTGATAACGGAAAGGAATGGCGTATCACCTCAATCCATGTCCATACCCCCAGAATCAGATACTTTGTGTGCACCTGAAAGTTCCAAGTGTGCCAGAGCTTGCCCCGGGAAGTGCACATGCAATCAGAAGCATCTCTTAGACATGCAGGAAAAAGAACTTATGGATCTGAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAGGAGATGCAGCTTCAGGTTCAGAGATTTTTTTATGATATTGGAAGTCAAGTACAGGAGATGTCAACCAAAGCTCTTGGATATCACAAAGTAGTAGAAGAAAATAGGAAGCTATACAACTTGGTCCAAGATTTGAAAGGTAATATTCGAGTTTATTGCAGAATCAGACCGGCATCCCGAGCTGAAACCAAGAATATTATTGATTTCATTGGGGAAGATGGTTCTCTATTTATTCTAGATCCATCAAAAACATTAAAAGATGGAAGGAAACTTTTTCAGTTTAATCGGGTTTTTGGTCCAACTGCTGGCCAAGGTGAGGTCTTTAAGGACACTCAACCATTGATTCGATCCGTGATGGATGGATTTAATGTGTGCATTTTTGCTTATGGTCAAACTGGATCTGGGAAGACTTACACCATGAGTGGTCCTTCCGGTGGAACATATAAGGATATGGGAATCAATTATCTGGCTCTTAATGATCTGTTTCAAATGTCTAATGAAAGGAAGGACATTATAGCATATGACATTTTTGTTCAAATGGTTGAGATTTACAATGAACAAATCCGCAGCTGCAATGATGATGGGATGAGCCTTCCTGATGCAACTTTGCGTCCGGTGAAGTCTACAAATGATGTCATCACCCTCATGAGACTCGGTGAGGTTAACCGTGCTGTCAGTTCTACTGCCCTCAACAACAGGAGTAGTCGCTCGCACAGTGTGCTTACTGTGCATGTTCATGGTAAAGATACATCCGGGAGCTCCATTCGGAGCTGTCTGCACCTGGTAGACCTTGCTGGAAGTGAAAGAGTAGACAAGTCTGAAGTTACAGGAGAAAGACTAAAGGAAGCACAGTTCATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCCTTGGCTCAGAAGAACTCTCACATTCCTTACAGGAACAGCAAACTCACCCTTCTTTTGCAGGACTCCTTAGGTGGACATGCTAAAACGTTGATGTTTGCTCACGTGAGTCCGGAAGCCGATTCTTTTGGTGAAACAATGAGTACTCTAAAGTTTGCTCAGCGTGTTTCCACTGTGGAACTAGGGGCTGCACGTTTGAACAAAGAAACCAGTGAGGTTATGCAACTCAAAGAACAGGTTGAGAGCCTTAAGATTGCATTGGCAAATAAGGAAAATTCTAAAGCACTGCTGAGTAGAGTTAACACTCCATTAGAGAGGCCAATGTTGGGGTCTGAGAAAACGCCACTGCGCCCTCGCAGACTCAGCATTGAGAACGGCAGTACCGCCATAAAGACTGTAAAACCTGAGGATAAAAGTGGAGCCAAATCACCTTCCTACATACCTCGTTCAAGAAGATTAAGCTTGGAAGGTTCAAGAACTACCAAGATTCTACAACCAAAGGTAGAATCCGCTGATGTAAGGAAAACTCTGCAGTATGAGCCAGTGTCTCAGCACAAATATCATCCGCAGCAAGATCCAGAAGTGGTGACAAAGCTAAATGGCCAATTAAGCAATGGTAATGTCAAAGCTCCTCGGAGTCCTACAAGCATTACCTATCAGAAAAGGTTGATAAAACTAGATAGTGGGGTCCAAATTCATCCTCTTAAACTACCTCAGACACCTGAAGTACCAGTGCTAGATGAAAACAATGCACATAGAGCTGTACCAAGTGAACTTGGATGTTGCACTGATTCACAGCCAACAAAGGTGAACGGTAGCACAAATGGAAAAGGATCCCAAATAAGAAGGTCCCTAAGAACAATTGGGAAACTGATCAATGGCCCAGACAAGAGGAACCAACAAATTATGGTTGAAGTGAAGGCACCCATCAAGGGCACTTTTCATGCAAATCCCATAAAATCACCACTACCAGCTAGTGAGAAGAAAATAAGAAGGCAATCTCTAACAGGGATTCCAGGACCAAACTCAAGGCGATCTTCACTTGGTGGGAAGCCAGTACCAGTAGCATATGACCAGGACAGAATTGCTAGAACGCCTCCTCCAGACACCAAGAATGCAAAACGGTGGCTATAA 3024 0.4352 MGDRLRNGVHDFNMASRKAEEAAWRRYEATQWLESQVGPLGISNQPTERELISCLRNGLVLCKAINKIHQGAVPKVVDIPVASQTFGWDSQPLPAYQYFENVRNFLVAAEELKLPAFEASDLERESVEMGSAGKVVDCILSLKLYQELKQNQNGCNKHLRSPLLMHSASRMHSKATAAVASDACRRLDLSATTEKTPVESNLPKREAEIVESLVKLLVDRMLEAKENIGGNMIASLRNEDLDPLKLLNQIMISCGEQPTSKFPENLITERNGVSPQSMSIPPESDTLCAPESSKCARACPGKCTCNQKHLLDMQEKELMDLKALKLKIKNEFEEMQLQVQRFFYDIGSQVQEMSTKALGYHKVVEENRKLYNLVQDLKGNIRVYCRIRPASRAETKNIIDFIGEDGSLFILDPSKTLKDGRKLFQFNRVFGPTAGQGEVFKDTQPLIRSVMDGFNVCIFAYGQTGSGKTYTMSGPSGGTYKDMGINYLALNDLFQMSNERKDIIAYDIFVQMVEIYNEQIRSCNDDGMSLPDATLRPVKSTNDVITLMRLGEVNRAVSSTALNNRSSRSHSVLTVHVHGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETMSTLKFAQRVSTVELGAARLNKETSEVMQLKEQVESLKIALANKENSKALLSRVNTPLERPMLGSEKTPLRPRRLSIENGSTAIKTVKPEDKSGAKSPSYIPRSRRLSLEGSRTTKILQPKVESADVRKTLQYEPVSQHKYHPQQDPEVVTKLNGQLSNGNVKAPRSPTSITYQKRLIKLDSGVQIHPLKLPQTPEVPVLDENNAHRAVPSELGCCTDSQPTKVNGSTNGKGSQIRRSLRTIGKLINGPDKRNQQIMVEVKAPIKGTFHANPIKSPLPASEKKIRRQSLTGIPGPNSRRSSLGGKPVPVAYDQDRIARTPPPDTKNAKRWL* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1313 1007 Coils Coil 696 723 - -
Lja1g1313 1007 MobiDBLite consensus disorder prediction 891 911 - -
Lja1g1313 1007 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 998 - -
Lja1g1313 1007 Gene3D Kinesin motor domain 322 691 IPR036961 -
Lja1g1313 1007 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Lja1g1313 1007 SMART ch_5 25 145 IPR001715 GO:0005515
Lja1g1313 1007 SUPERFAMILY Calponin-homology domain, CH-domain 22 152 IPR036872 -
Lja1g1313 1007 MobiDBLite consensus disorder prediction 945 1007 - -
Lja1g1313 1007 Pfam Kinesin motor domain 386 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1313 1007 MobiDBLite consensus disorder prediction 751 784 - -
Lja1g1313 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 688 IPR027417 -
Lja1g1313 1007 SMART kinesin_4 378 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1313 1007 Pfam Calponin homology (CH) domain 25 145 IPR001715 GO:0005515
Lja1g1313 1007 Coils Coil 311 338 - -
Lja1g1313 1007 Gene3D - 15 147 IPR036872 -
Lja1g1313 1007 ProSiteProfiles Kinesin motor domain profile. 380 689 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1313 1007 MobiDBLite consensus disorder prediction 888 911 - -
Lja1g1313 1007 PANTHER KINESIN-LIKE PROTEIN KIN-14L 3 998 - -
Lja1g1313 1007 PRINTS Kinesin heavy chain signature 590 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1313 1007 PRINTS Kinesin heavy chain signature 639 660 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1313 1007 PRINTS Kinesin heavy chain signature 453 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1313 1007 PRINTS Kinesin heavy chain signature 560 577 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1313 Lja-Chr1 13737920 13745784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1313 310 689 Calmodulin-binding Proteins AT5G65930 39.206 2.23e-68 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1313 K10406 - gmx:100786642 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1313 1 13737920 13745784 Lja1g1313 1 13737920 13745784 ECH