Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1280 ATGCTTGAACAGGAGTGTCTTCTTAGATCAGCATTGTTGCTATGTATTTTTGTTGGCTTCTTGGTACATCCTGTTGTGGCAGCTGTGATACCGTTGGGTTCGAAACTTTCTGTGATTGACAACAATTGTTGGGTTTCCTCCAATGGGGATTTTGCATTTGGGTTCTTCAACATTTCAGATGAACCTAACCAGTTTAGTGCTGGCATTCGTTTCAATTCAAAGTCTATGCCATATAGCAAACAACCAGTGGTTTGGGTTGCTGGTGCTCATGTCACAGTAAGCAACAGGTCATATTTCCAACTCACTCCTGAAGGGGAACTTGTCCTGTTTGATTCCTTACAAGGAGTCACTGCATGGACCAGCGGAACGCGCAACCGATCCGTTGTTTCAGCGTCTCTTCATGATAATGGCAACCTTGTTCTTCTAGACACCAAGCAAAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTCTCCCAGGGCAGAGTTTATCTGTTTATCAGACACTTCGGGCTTCAACCAAGAATCCCACAGCTAGTTACTACACTCTTTTCATGAATGCTTCTGGTCAGATGCAGCTTCGCTGGGAGAGTAATGTTATATACTGGACTAGTGAAAGCCCCTCCTCAGCTTCAAATCTCACTGCATTCCTTACAACTGGTGGAGCTCTGCAACTTCGAGACCAAAGTTTGAAACCTATTTGGACAGTGTATGGAGAGGACCATAATGATTCCGTGAACTACCGGTTTCTTAGGCTAGATTTGGATGGCAATCTCCGCTTATACTCGTGGACTGAAACTTCACAGTCATGGAGATCAGTCTGGCAAGCTGTTGAGAACCAGTGCAAGGTCTTTGCAACATGTGGTCAGCGCGGTGTCTGTGTCTTCACTGCTTCCGGTTCTGCTGATTGCAGGTGCCCTTTTGAGGTTACCGAGACTAACAAGTGTTTCGTCCCATATGAACAGGATTGTGAATCTGGCTCCAGTATGATGTCGTATAAGAACACTTATCTATATGGAATTTACCCTCCTGATGATCCAGTATTCATAAGTAATTTGCAGGAATGTGAGAAGTTGTGCTTGAATGACACACAGTGTACAGTTGCAACCTTTTCCAACAATGGTAGTCCCCAATGCTCCATTAAGAGAACTAAGTATATTACTGGCTATGCAGATCCATCTATAAGCTCAATTTCATTTGTTAAGAAGTGCTCAGGTCCATTTGCTGTGAATCCTAACATCATGAAGTCACCTCCACTAAAACTGCCTCGTAGGCTATGTGTTACTTGTCTAATGGAAGCATTCTCCGGAACACTTTTCATCTTTGCGATCCTCCAGCTGGGAATTGTTTTCTGCATCTGCCGAAGAAAGAAAAACTCTACTATGAGAAATGTCACTTTGGCTTTGACACGCCCGAATTCGAAGGCTTTAGTCGTGTTAACCTTCTCAGAAATCAAAAGCCTCACTCGGGATCTCCAGAATCAAATTGGGCCAAACATGTTCAAGGGCGTGCTACCAAGCAATCGCCCTATTGCAGTGAAAGACCTGGACGCATCCATAGAAGAAAGGAAGTTCAGGAGTGCGGTTTTAAAGCTAGGGAGCATCCACCACAAGAACCTTGTGAAGCTGGAGGGTTATTGCTGCGAGTTTAACCATAGGTTTTTGATGTATGAATATGCTGATAATGGTTCACTGGATAAGTACTTGGATGATTCCACTCTGTGCAAGAGGCTAACTTGGAGAAAGAGGGTTGAAATATGCTCAAGTGTGGCAAAGGCCATCTGTTATTTGCATTCTGGGTGCGTCGAGTTTGTAAGCCATGGAAATTTGCGATGTGAGAATGTGATATTGGATGAGGATGCAGTGGCCAAGGTGTCTGAATATGGGTTTGCAATAGTGGATGGTGTGGCCACATATTGTGGCTTTTCAGCTGAAAAAGATGTAGAGGATTTTGGCAAGCTAGTGTTAGCCTTGTTGACGGGACGCCTCCGAGATCGTCGACAACTTTGTGAGTGGGCATATGAAGAATGGATGGAAGGTAATGCAGCAACTAATGTGGTTGATAAAAGGATTGAAGGCGGTGCTGATTCAGAGGAACTGGAGCGTGCTTTAAGAATTGCATTCTGGTGCGTTCAAAGGGATGAGCGTAGAAGACCTTCTATGGAGGAGGTAGTGAGAGTGCTGGATGGTACTTTGAATGTTGATCCGCCACCGCCTCCATTTGCCTTTCAGGGGTCATCATTACATGAAGATGATGCACCAGAAAATGGTTCAGAATCAGTGCTTCAGTAG 2298 0.4434 MLEQECLLRSALLLCIFVGFLVHPVVAAVIPLGSKLSVIDNNCWVSSNGDFAFGFFNISDEPNQFSAGIRFNSKSMPYSKQPVVWVAGAHVTVSNRSYFQLTPEGELVLFDSLQGVTAWTSGTRNRSVVSASLHDNGNLVLLDTKQNIIWQSFDTPSDTLLPGQSLSVYQTLRASTKNPTASYYTLFMNASGQMQLRWESNVIYWTSESPSSASNLTAFLTTGGALQLRDQSLKPIWTVYGEDHNDSVNYRFLRLDLDGNLRLYSWTETSQSWRSVWQAVENQCKVFATCGQRGVCVFTASGSADCRCPFEVTETNKCFVPYEQDCESGSSMMSYKNTYLYGIYPPDDPVFISNLQECEKLCLNDTQCTVATFSNNGSPQCSIKRTKYITGYADPSISSISFVKKCSGPFAVNPNIMKSPPLKLPRRLCVTCLMEAFSGTLFIFAILQLGIVFCICRRKKNSTMRNVTLALTRPNSKALVVLTFSEIKSLTRDLQNQIGPNMFKGVLPSNRPIAVKDLDASIEERKFRSAVLKLGSIHHKNLVKLEGYCCEFNHRFLMYEYADNGSLDKYLDDSTLCKRLTWRKRVEICSSVAKAICYLHSGCVEFVSHGNLRCENVILDEDAVAKVSEYGFAIVDGVATYCGFSAEKDVEDFGKLVLALLTGRLRDRRQLCEWAYEEWMEGNAATNVVDKRIEGGADSEELERALRIAFWCVQRDERRRPSMEEVVRVLDGTLNVDPPPPPFAFQGSSLHEDDAPENGSESVLQ* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1280 765 PIRSF SRK 2 764 IPR024171 GO:0004674
Lja1g1280 765 SMART blect_4 35 156 IPR001480 -
Lja1g1280 765 MobiDBLite consensus disorder prediction 738 765 - -
Lja1g1280 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 174 275 IPR036426 -
Lja1g1280 765 ProSiteProfiles Protein kinase domain profile. 484 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g1280 765 SUPERFAMILY Protein kinase-like (PK-like) 503 730 IPR011009 -
Lja1g1280 765 SMART ntp_6 327 405 IPR003609 -
Lja1g1280 765 PANTHER OS07G0415500 PROTEIN 8 759 - -
Lja1g1280 765 Gene3D Transferase(Phosphotransferase) domain 1 563 737 - -
Lja1g1280 765 ProSiteProfiles PAN/Apple domain profile. 326 406 IPR003609 -
Lja1g1280 765 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 8 759 - -
Lja1g1280 765 Gene3D - 27 154 IPR036426 -
Lja1g1280 765 Pfam D-mannose binding lectin 83 170 IPR001480 -
Lja1g1280 765 Gene3D - 155 275 IPR036426 -
Lja1g1280 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 159 IPR036426 -
Lja1g1280 765 ProSiteProfiles Bulb-type lectin domain profile. 157 276 IPR001480 -
Lja1g1280 765 Pfam Protein tyrosine and serine/threonine kinase 510 633 IPR001245 GO:0004672|GO:0006468
Lja1g1280 765 Pfam PAN domain 334 402 IPR003609 -
Lja1g1280 765 Pfam S-locus glycoprotein domain 246 308 IPR000858 GO:0048544
Lja1g1280 765 CDD B_lectin 45 156 IPR001480 -
Lja1g1280 765 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Lja1g1280 765 Gene3D Phosphorylase Kinase; domain 1 454 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1280 Lja-Chr1 13207090 13210943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1280 389 737 Receptor kinase-like Gene Family AT1G56120 31.347 4.36e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja1g1280 PK_Tyr_Ser-Thr 1.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1280 - - gmx:100809478 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1280 1 13207090 13210943 Lja1g1280 1 13207090 13210943 ECH