Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1247 ATGGAGGATGCTAGTTTTTTCTTCTACACCATCTTCTCGTCCTTAGCCTTGCTAGTTTTTTTTAGTTTTCTTGTCAAGTCCCTAACCACAATAACCGCCAAAAACAGCACCAAACATGGGCCGCCACCAAGCCCACCCTCCCTACCCATCATCGGCCACCTCCATCTCATGGGCTCCTCCGTCATCCCCAAATGCTTCCAAACTTTAGCCCGCCGCCACGGCCCGCTCATGCACCTCCGCCTCGGCGCCTCAACATGCATAGTCATCTCCAACGCCCAAACCGCCACAGAAATCATGAAAACACATGACCTCAACTTCTGCAACCGACCACACTTCGGTTCCTCCGACCACTTCCTCTACAAAGGCTCTTACTTCATCACCGCCCCGTACGGACCATACTGGCGGTTCATGAAGAAGCTCTGCGTCACTCAGCTCCTCTCAACCTCCAACCTCAACCGCTTCACTCACATCCGAGAGCAAGAGATTAATAATCTCTTGAAATCTCTGGCGGTTTGTTCAAATGAAGGAACTGCCACTGATTTGAGCTCAGACCTCACTGTTTTAACCAATAATGTTCTTTGTCAGATGGCTATGAGCAGCACGTGCTTCGATGAGGTTAATGATGTCGGGGAGATTCAGTGTTTGGTTAAGGAGTTTTTGCATGTTGGTGCTAAATTGAGCATGGGTGAGGTGTTTGGGCGCTTAGGAAAGTGGGACTTGTTTGGATATGGGAAAAAGCTTGTGAAGATTGTGGGGAAATTTGATAGGATCTTGGAGCGTGTGATGGTGGAACATGAAGGGAAAGTTAATGAGGTTGGTTTTCAAGGAGACATGATGGATATTCTATTGCAGGTTTATAGGAATCCAGATGCTGAAGTGAAGTTGACCAGGAATGATATCAAAGCTTTCTTCTTAGATATCTTCCTAGCTGGAACAGACACCTCTTCAGTGGCATTGCAATGGGCCATGGCAGAGATAATGAACAACCCAAGAATATTAAACAAGTTAAAGGCAGAGATTGATGCAGTGGTGGGAGCTAGCACACTGGTTAAGGAATCAGATATTCCAAATCTACCTTACCTCCAAGCTATTGTGAAAGAAGTGTTGAGACTCCATCCACCAGCACCATTTGCTCTAAGACAATCAATTGAAGACTGCATCATCAATGGCTATGATATAAAAGGCCAAACCAGGACACTGATCAATGTCTACGCCATTATGCGGGACCCGGAAGCGTGGGCGAATCCAGAGGAGTTTATACCAGAGAGGTTCTTGGATGATGATCAAAATGTGATGAAAATGAAGAGTGAAGATTTTAGGTACATTCCATTTGGGTTTGGCAGGAGAGGGTGTCCTGGGGATTCACTTGCTTTGATGGTGATACAAGTGACACTTGCAGCTCTAGTTCAATGTTTTGATTGGAAAATCAAAGGGGGAGACAAGGTTAATATGGAAGAAGGGTCATCATTTTCGGCAGGATTGGCAAAGCCACTAGTGTGTTACCCTGTCATTTGTTTAAATCCTTTTTAA 1530 0.4562 MEDASFFFYTIFSSLALLVFFSFLVKSLTTITAKNSTKHGPPPSPPSLPIIGHLHLMGSSVIPKCFQTLARRHGPLMHLRLGASTCIVISNAQTATEIMKTHDLNFCNRPHFGSSDHFLYKGSYFITAPYGPYWRFMKKLCVTQLLSTSNLNRFTHIREQEINNLLKSLAVCSNEGTATDLSSDLTVLTNNVLCQMAMSSTCFDEVNDVGEIQCLVKEFLHVGAKLSMGEVFGRLGKWDLFGYGKKLVKIVGKFDRILERVMVEHEGKVNEVGFQGDMMDILLQVYRNPDAEVKLTRNDIKAFFLDIFLAGTDTSSVALQWAMAEIMNNPRILNKLKAEIDAVVGASTLVKESDIPNLPYLQAIVKEVLRLHPPAPFALRQSIEDCIINGYDIKGQTRTLINVYAIMRDPEAWANPEEFIPERFLDDDQNVMKMKSEDFRYIPFGFGRRGCPGDSLALMVIQVTLAALVQCFDWKIKGGDKVNMEEGSSFSAGLAKPLVCYPVICLNPF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1247 509 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 6 509 - -
Lja1g1247 509 Pfam Cytochrome P450 42 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 SUPERFAMILY Cytochrome P450 42 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Lja1g1247 509 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1247 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1247 Lja-Chr1 12852091 12856200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1247 11 509 Cytochrome P450 AT2G42250 50.688 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1247 - - lja:Lj1g3v4303210.1 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1247 1 12852091 12856200 Lja5g2275 5 39746475 39748771 PCT
Lja5g2278 5 40008420 40011296 Lja1g1247 1 12852091 12856200 PCT