Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1246 ATGGCTGATTACCAAACATACATCCTACTTTTCCTAACATGGCTAGTGTCCTTAATTGTAGTCCGAACCATCTTCACCAGAAAACAGAATAAGCTTCATCTCCCACCAAGCCCCTTCGCCTTACCGATCATCGGACACCTCCACCTCCTTGCTCCAATCCCCCACCAAGCCCTCCACAAGCTCTCAACCCGCCACGGGCCCATAATGCACCTCTTCCTCGGCTCCGTCCCTTGTGTCGTTGCCTCCACCGCAGAATCTGCCAGAGAGTTTCTTAAGACCCAAGAAACCCACTTCTCCAACCGCCCGCAAAGCTCGGCCGTCCATTACCTCACATATGGCTCCCAGGACTTCTCCTTTGCCCCGTATGGACCTTACTGGAAATTCATGAAGAAAATCTGCATGTCCGAGCTTCTTGGCGGTCACACACTCACAGAACTTCTTCCTGTGAGGAGGCAAGAGACTACAAGGCTTATGAGAGTTTTTCTCAAGAAAGGGAAATCAGGTGAGGATGTTGATGTTGGTGGAGAGCTACTGAGGCTGTCGAATAGCGTCGTGTCGAGGATGATCATGAGCCAGAGTTGTGAAGATGATGGTGAAGCGGAAAAGGTGAGGAAGATGGTGCAGGACACCGTGTTTCTCACCGGGAAGTTTAATGTTTCGGATTTTATTTGGTTCTTGAAGAACTGGGACTTGCAGGGGTTTGGGAAAGGGCTTAAGGAGATTCGGGACAGGTTTGATGCCATGATGGAGAGGGTGATCAAGGAGCATCAAGAGGAGAGGAGGAAAAGAAAGGAACTTGGTGGAGGAGATGGCAGAATCAAGGACCTGCTTGATATATTGTTGGACATTCATGAAGATGAGAGCTCTGAGATTAAATTGACAATGGAGAACATAAAGGCCTTCATCTTGGACATATATATGGCAGGAACTGATACTTCAGCCTTAACAACAGAATGGGCTCTGGCAGAGTTAATTAACCACCCACATATGATGGAGAGAGCAAGGCAAGAGATTAACTCAGTAGTTGGAAATAGTAGAATAGTAGAAGAATCAGACATTGTGCACCTTCCTTACCTGCAAGCTATAGTGAAAGAAACACTGAGGATTCACCCAACAGGGCCACTAATTGTGAGAGAATCATCTGAAAGTTGCACCATATGGGGCTATGAGATTCCAGCAAAGACCCAGTTGTTTGTTAACATATGGGCTATTGGCAGGGACCCCAATCACTGGGAGAACCCACTTGAGTTCAGGCCAGAGAGGTTTATCAGTGAAGAGGGAAGTGGGAAGAGTTTAGATTTGAGGGGCCAACATTTTCACCTGATTCCATTTGGGAGTGGAAGAAGAGGGTGTCCTGGAACCTCATTGGCTTTGCAGGTTGTGCAGACAAACCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTTAGTGGGGGCAAAGAGAGGGTTGACATGGAAGAGAAACTTGGGTTGACCCTTTCAAGGGCTCATCCCTTGATGTGTATCCCTGTGCCTAGGCTTGATCCTTTTCCTGCCATGTGA 1542 0.476 MADYQTYILLFLTWLVSLIVVRTIFTRKQNKLHLPPSPFALPIIGHLHLLAPIPHQALHKLSTRHGPIMHLFLGSVPCVVASTAESAREFLKTQETHFSNRPQSSAVHYLTYGSQDFSFAPYGPYWKFMKKICMSELLGGHTLTELLPVRRQETTRLMRVFLKKGKSGEDVDVGGELLRLSNSVVSRMIMSQSCEDDGEAEKVRKMVQDTVFLTGKFNVSDFIWFLKNWDLQGFGKGLKEIRDRFDAMMERVIKEHQEERRKRKELGGGDGRIKDLLDILLDIHEDESSEIKLTMENIKAFILDIYMAGTDTSALTTEWALAELINHPHMMERARQEINSVVGNSRIVEESDIVHLPYLQAIVKETLRIHPTGPLIVRESSESCTIWGYEIPAKTQLFVNIWAIGRDPNHWENPLEFRPERFISEEGSGKSLDLRGQHFHLIPFGSGRRGCPGTSLALQVVQTNLAAMIQCFEWKVSGGKERVDMEEKLGLTLSRAHPLMCIPVPRLDPFPAM* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1246 513 Pfam Cytochrome P450 35 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 510 - -
Lja1g1246 513 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 510 - -
Lja1g1246 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Lja1g1246 513 Gene3D Cytochrome P450 19 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1246 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1246 Lja-Chr1 12848457 12850725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1246 1 506 Cytochrome P450 AT5G06900 51.473 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1246 K24188 - gmx:100779342 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1246 1 12848457 12850725 Lja1g1246 1 12848457 12850725 ECH
Lja1g1246 1 12848457 12850725 Lja5g2278 5 40008420 40011296 PCT