Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1235 ATGGCAGGGACTGGTTTCCACACTTCCTGTCTAAGTCTCTCCTCCTCCAGCAATTTAGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCCTGCCAGGGAAACTACCTGGAAGGAGAAGCTTGACATTGAAAGCAGAAGTGAAGTTTGTAAATGCTGAACAAGCCAAGGAGCTCATAGCAGTGGATGGATATAGTGTTCTGGACGTGCGGGACATAACTCAGTTTGAGCGAGCTCACATTAAATCATGCTATCATGTGCCTCTTTTTGTTGAAAATAAAGACAATGATCCAGGTACAATCATAAAAAGGACTCTGCACAATAATTTTTCTGGGTTGTTCTATGGGTTACCATTCACAAAGCCAAATCCTGAGTTTGTACAATCTGTCAAGAGCCAGATTCCGCCTGAAAGTAAAGTCTTGGTTGTATGTCAGGAAGGACTGAGGTCTACTGCAGCTGCAGATAGGTTAGAGAAAGCTGGTTTCGAAGATGTAGCATGCATAACTTCTGGCCTTCAATCTGTGAAACCAGGAACATTTGATACTGTTGGCTCCAAGGAGTTGCAGGATGCTGGCAAAGCGGGTTTGGTGACGATCCAAGGAAAAATTTCAACTGTGTTGGGAACAGTTCTTGTTTGTGCATATCTATTTATTACCTTTTTTCCTGATCAAGCAGAGAAGCTGTTCCAATTGGTCCCTGCAGGCTAA 714 0.4342 MAGTGFHTSCLSLSSSSNLGTCWLVLKTHNARALPGKLPGRRSLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDPGTIIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLRSTAAADRLEKAGFEDVACITSGLQSVKPGTFDTVGSKELQDAGKAGLVTIQGKISTVLGTVLVCAYLFITFFPDQAEKLFQLVPAG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1235 237 SMART rhod_4 53 183 IPR001763 -
Lja1g1235 237 ProSiteProfiles Rhodanese domain profile. 63 186 IPR001763 -
Lja1g1235 237 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 47 175 IPR036873 -
Lja1g1235 237 Gene3D - 41 184 IPR036873 -
Lja1g1235 237 Pfam Rhodanese-like domain 55 177 IPR001763 -
Lja1g1235 237 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 236 IPR044615 -
Lja1g1235 237 CDD RHOD 57 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1235 Lja-Chr1 12747997 12751707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1235 1 231 Sulfurtransferasese or Rhodanese AT2G42220 67.965 2.52e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1235 - - gsj:114398290 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1235 1 12747997 12751707 Lja1g1235 1 12747997 12751707 ECH