Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1226 ATGGTCAAACGCAAAATCCACCACGACGGTAGCACCACCACCACCGAGAATGCCGATTCTGACGACGCCGCTGATTATCATCAAACTCGTCACGCCCGTCGTGGTCTTCGTTCTAGCTACCTCGCCATCAAGAACAGGATTCACGATGAAAAGGATGAAATTGCAAGCCCTGAGTCTAAGAAATTTGATTTGATCTTTGGTGAAATGGAAAGCTTACACCAATTAGTTACAAAACCAAGAGAACAAGTTGCTGATGCACAGGCTCTATTGGACATCACCAAATCCTTGGTGGTGACTGCGAGAGCTCATGGTGGCGGTGGACTCACTCCTTCTAGCTTTGTCGCCCACATGCTTAAGGAATTTGGAGGAAAAGGTGGAGGAGCAACTACTAGCACTGAAGATTGTAGCAGAAACTTAATAGCTTGGAAGGATATTGGAGTTGCAGTTTCATATGTTTTTGGAGGGGGTTATGGCTGTTCTACAATGATTGGCCCAATCGATGCTAAAATAAAGCAGAGGAAGGTCATTAAACGTAGAAAGCAAGTGAAATCCATTGAATTGGCTCGGCCAGAAGAGCTTGGCGGAGGTATAAGCGAAGAGAAAACTGATACTGATAAAAATATGTTAACTATGTTTAACATCTTAAAGAAAAATAGAGTTGTCAGGCTTGAAAATCTGGTTTTGAATAGAAACTCCTTTGCACAAACAGTGGAGAATTTATTTGCTTTATCTTTTTTAGTCAAAGATGGGCGAGCTGAAATAAGAGTGAATGAGGCTGGACAGCAATTAGTTTTGCCAAGGAATGCTCCTGCTGCAAATGCAGTTCTTACTAAGGACGTTGCTTTCAGCCACTTTGTATTCCGATTTGACTTCAATGATTGGAAGTTGATGGTTAGCACTGTTGGGGTCGGGGAGGAGTTGATGCCAGATAGAAATAGTCAATGA 945 0.4275 MVKRKIHHDGSTTTTENADSDDAADYHQTRHARRGLRSSYLAIKNRIHDEKDEIASPESKKFDLIFGEMESLHQLVTKPREQVADAQALLDITKSLVVTARAHGGGGLTPSSFVAHMLKEFGGKGGGATTSTEDCSRNLIAWKDIGVAVSYVFGGGYGCSTMIGPIDAKIKQRKVIKRRKQVKSIELARPEELGGGISEEKTDTDKNMLTMFNILKKNRVVRLENLVLNRNSFAQTVENLFALSFLVKDGRAEIRVNEAGQQLVLPRNAPAANAVLTKDVAFSHFVFRFDFNDWKLMVSTVGVGEELMPDRNSQ* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1226 314 MobiDBLite consensus disorder prediction 1 31 - -
Lja1g1226 314 PANTHER UNCHARACTERIZED 2 314 IPR027786 GO:0005634|GO:0006281|GO:0030915
Lja1g1226 314 Pfam Nse4 C-terminal 221 308 IPR014854 -
Lja1g1226 314 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 2 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1226 Lja-Chr1 12643235 12646231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1226 33 313 Non-SMC Element family AT1G51130 51.957 1.00e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1226 K22825 - gmx:100781485 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1226 1 12643235 12646231 Lja1g1226 1 12643235 12646231 ECH