Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1209 ATGGTATTTTCCACAAATCATGGTGGAAGTGTTTGGCAAAACAGCAAAGGCTTCACCCTCCAAGTCCTCACAGGAAGATGGTTCATGGTGTTTTCCTCATTCATGATCATGTCAGTATCAGGAGCAAGCTACATGTTTGGCCTCTACTCCAGAGAAATCAAGTCAGTTTTGGGCTATGACCAATCCACCCTCACTCTTCTAAGCTTCTTCAAAGACTTAGGTGCCAACTTTGGCATTCTCTCAGGCCTAGTCAATGAAATCACACCCCCTTGGGTTGTCCTAACAGTTGGTGGTGTTCTCAATTTCTTTGGCTACTTCATGATCTGGCTTGCTGTGACAAAAAAAATCACCAAACCTCAAGTGTGGAACATGTGCTTGTACATCTTCATTGGAGCCAATTCTCACTGCTCAACCAACACTGGAGCTTTAGTCACTAGTGTGAAGAATTTCCCTGGAAGCAGAGGAATTGTCTTAGGCCTTTTGAGTGGTTATCTGGGTCTAAGTGCAGCAATCATCACTCAACTTTACTATGCCTTCTATGGAAATGACTCAAAATCTTTGATTTTGCTCATGGCTTGGCTTCCAACTGCAACAACCTTTGTATTTTTGCCAGTTATCAAGCACCACAAGGGAGTTCAAAAGGCAAATGATTCAAAAACTTTCTATAATTTCCTCTACTTGACTCTAGTCCTTGCAGGGTTCCTCTTGGTAATGATCATAGTGCAAAAAGCTTTCAACTTTACAAAAAATGGATACTATGTCACTTCCACTGTGATGCTTCTCTTGCTAATCCTGCCACTTGTTGTTGTTATCATTGAAGAACAAAAGATTTGGAACGTGAAGCAAGAAAGCATCTATAGTGAAAATCCTCCTAAGCCTCTGAATATAACTTCAGAGATGCCAGATCTTCAGAAGCCAAATGCTTCCCAAGAAGGAGAAACTACCCAAAACCAAAAGCAAGTTTCATGTTGGAGAGACATGCTGAATCCCCCAAGAAGAGGTGAAGATCACACAATTCTTCAAGCCCTTTTCAGCCCTGACATGGTGATTCTTTTCTTTGCCACAATTTGTGGACTTGGTGGGAGCCTCACTGTGGTAAACAACTTGAGCCAAATTGGGTTATCTTTAGGGTACCCTGCACATAGCATAACCACATTTGTGTCCCTCTTGGCAATTTGGATCTACATGGGTAAAATTGTGCAAGGTGTTGTCTCAGAGTACATCATAGCCAAGTATAAAGTCCCTAGGCCTATCATACTCACATTAATTCTTGTGTTATCTTGTTTTGGTCATCTTCTAATTGCTTTTAATGTCCCCAATGGTCTCTATGCAGCCTCAATTATTATTGGGTTCTGCTTTGGGGCAAATTGGCCATTGCTGTTTTCCATCATATCTGAACTTTTTGGGCTTAAATATTACTCAACTTTGTACAATGTTGGGTCAGTTGCAAGCCCAATTGGGTCATATTTGTTCAGTTTGAGGGTTGCAGGGTATTTGTATGACAAGGAAGGTAGAAGGCAAATGGAAGCATTGGGGTTGAAGAGGAAGCCAGGGGAAGAGTTGAATTGTAATGGGAGTGACTGTTACAGAAAGGCTTTCATTATAATCACTGCAGTGACCTTGCTTGGGGCACTTGTGTCTCTCATTTTGGTGCACAGGACTAGAGAGTTTTATAAAAGTGACATATACAAAAAGTTCAGAGAAGAAGCTAAAAGTGTTGAAACTGAAATGAATGTGACTCAGAACAAGGTTGATCCTGCTGCAAATGAAGGATAG 1776 0.4127 MVFSTNHGGSVWQNSKGFTLQVLTGRWFMVFSSFMIMSVSGASYMFGLYSREIKSVLGYDQSTLTLLSFFKDLGANFGILSGLVNEITPPWVVLTVGGVLNFFGYFMIWLAVTKKITKPQVWNMCLYIFIGANSHCSTNTGALVTSVKNFPGSRGIVLGLLSGYLGLSAAIITQLYYAFYGNDSKSLILLMAWLPTATTFVFLPVIKHHKGVQKANDSKTFYNFLYLTLVLAGFLLVMIIVQKAFNFTKNGYYVTSTVMLLLLILPLVVVIIEEQKIWNVKQESIYSENPPKPLNITSEMPDLQKPNASQEGETTQNQKQVSCWRDMLNPPRRGEDHTILQALFSPDMVILFFATICGLGGSLTVVNNLSQIGLSLGYPAHSITTFVSLLAIWIYMGKIVQGVVSEYIIAKYKVPRPIILTLILVLSCFGHLLIAFNVPNGLYAASIIIGFCFGANWPLLFSIISELFGLKYYSTLYNVGSVASPIGSYLFSLRVAGYLYDKEGRRQMEALGLKRKPGEELNCNGSDCYRKAFIIITAVTLLGALVSLILVHRTREFYKSDIYKKFREEAKSVETEMNVTQNKVDPAANEG* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1209 591 Gene3D MFS general substrate transporter like domains 343 561 IPR036259 -
Lja1g1209 591 MobiDBLite consensus disorder prediction 291 317 - -
Lja1g1209 591 SUPERFAMILY MFS general substrate transporter 21 214 IPR036259 -
Lja1g1209 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 591 - -
Lja1g1209 591 PANTHER MFS TRANSPORTER 7 591 - -
Lja1g1209 591 Coils Coil 563 583 - -
Lja1g1209 591 Pfam Nodulin-like 26 271 IPR010658 -
Lja1g1209 591 CDD MFS_Mch1p_like 25 544 - -
Lja1g1209 591 SUPERFAMILY MFS general substrate transporter 233 556 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1209 Lja-Chr1 12484076 12486226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1209 4 569 Nodulin-like Gene Family AT2G39210 60.771 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1209 - - gmx:100789645 905.59