Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1184 ATGATTTTGAATTTAAATTTGCTTAAACTACTGTTTATTTTGGTTCCTTTGTTTTGTTTAGTGAGACTGCAAGAGACGCTCCTTTTGGATATAATTGGTGAGAACATTAAGTTTACAGATGCAAGTGAAGTATTTCCAACAATAGAACGCCGGCTCCGAGGAAAGAAGGTTCTGTTGGTTCTTGATGATATTAGCAATGATGAGCAGTTGGACTCATTAGCTGGAAACCATGATTGGTTTGGTACTGGTAGCAGAGTCATCATAACCACTAGGTTTCCATTTTTGCTTAAATTCCATGGCGTTCATCACCAATACAAGCTCGAGCTATTACACGAAGAAGAAGCTCTCGAGTTATTTTGTTGGAAGGCCTTCGAAAGTAGAGATGTGGATCCGATTTATATGGAACTATCAAAAAGTATAGTGAGATATACCCAAGGTATTCCATTGGTCTTGGAATTAATTGGTTCTGGCTTGTTTGGTAAGCCAATTTCTGAATGGAAATACATTTTTGACAGTTACCTTAGTCATGGTGAGGACGATCAAAGTATTTGGAGGCTCCTTCATAAGATCAGCTATGAAGGTTTGGATGATGATGTGAAAACAGTTTTCCTTGACATTGCATGTTGCTTCAATGGTTACAAAGTGGACTTTCTTACTGATTTGTTTTTAAATGCTCGTGGTTTCTCTCCAACATATGCTTTACAAGTGTTGATTTCCAAATCATTAATAAAGATAGATGGTGGTGTGGTTAGAATGCATGACACGGTACAGATGATAGGTAGGTCAATTGTTAAGGAGGAACCACCTATAGAGCCTGGTAAACGCAGTAGATTGTGGTACTATGAAGACATTCTTGATGTCCTAAAAAACAATACGGGAGGTCCTGCTGTTGAAATCATGAAGATTGACTTGCCTAAAGATAAACAAGTGCTTTGGGATGGAAACGGGTTCAAGAATATGGAAAACCTCAAAATTCTTGAAATTATAAACGCACGCTTTTCAGAAGTTCCCAAGATCTTCGCAAACAGTCTGAAAGTGTTGAATTGGAAAGGATACTTTGGAGGAGCGAACCAGTGA 1077 0.3816 MILNLNLLKLLFILVPLFCLVRLQETLLLDIIGENIKFTDASEVFPTIERRLRGKKVLLVLDDISNDEQLDSLAGNHDWFGTGSRVIITTRFPFLLKFHGVHHQYKLELLHEEEALELFCWKAFESRDVDPIYMELSKSIVRYTQGIPLVLELIGSGLFGKPISEWKYIFDSYLSHGEDDQSIWRLLHKISYEGLDDDVKTVFLDIACCFNGYKVDFLTDLFLNARGFSPTYALQVLISKSLIKIDGGVVRMHDTVQMIGRSIVKEEPPIEPGKRSRLWYYEDILDVLKNNTGGPAVEIMKIDLPKDKQVLWDGNGFKNMENLKILEIINARFSEVPKIFANSLKVLNWKGYFGGANQ* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1184 358 Gene3D - 109 196 IPR042197 -
Lja1g1184 358 PANTHER ARCHAEAL ATPASE 20 352 - -
Lja1g1184 358 Gene3D - 17 99 IPR027417 -
Lja1g1184 358 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 352 IPR044974 GO:0006952
Lja1g1184 358 PRINTS Disease resistance protein signature 318 334 - -
Lja1g1184 358 PRINTS Disease resistance protein signature 144 158 - -
Lja1g1184 358 PRINTS Disease resistance protein signature 51 65 - -
Lja1g1184 358 SUPERFAMILY "Winged helix" DNA-binding domain 188 289 IPR036390 -
Lja1g1184 358 Pfam NB-ARC domain 44 175 IPR002182 GO:0043531
Lja1g1184 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1184 Lja-Chr1 12121843 12123242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1184 17 352 WRKY Transcription Factor Family AT5G45050 30.854 3.37e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1184 - - lja:Lj0g3v0104929.1 331.257