Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1098 ATGGGTAACGCGGACTGTGCTTCAACCATGAACGTTGAGGGCGTGGCGCACCGGGTGGCGGTGCCTCCGCCTGTACCGTTCTTCAAGTCTCTGAAGAACTCTATGAAGGAAACCTTCTTCCCAGATGACCCCTTGAAGAAGTTCAAGAACCAACCAGCTTCTAAGAGGGTGGTGCTTGGTCTTCAGCACTTCTTTCCCATCTTGGAGTGGGCACCGAGATACAACGTCCAGTTCTTGAAATCAGACCTCATAGCTGGGATCACCATTGCTAGTTTGGCTATACCTCAGGGAATCAGCTATGCCAAACTTGCCAACCTCCCTCCGATTCTCGGCCTCTATTCAAGCTTTATACCGCCATTGGTTTACGCCATGATGGGTAGCTCGAGGGATTTGGCGGTGGGAACAGTGGCGGTTGGATCACTTCTGATGGCTTCTATGCTGGGTCGTGAGGTTAATCCTAATGACAACCCAAAGCTTTTTCTGCACCTTGCTTTTACAGCTACATTCTTTGCTGGAGTTTTGCAAGCATCATTGGGTCTCTTCAGGTTAGGGTTCATTGTGGATTTTCTGTCACATGCGGCCATTGTAGGGTTCATGGGAGGTGCAGCCACCGTGGTTTGCTTGCAGCAGCTGAAATCAATTCTAGGCCTTGAACATTTCACCCATGAGGCCGATCTTGTGTCAGTGATGCGCTCTGTTTTTAGCCAAACACATCAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTCCTCCTCGTCACAAGATACTTTAGCAAACAACGACCCAAGTTCTTTTGGGTGTCAGCAATGGCCCCGTTAACGTCAGTTGTATTGGGAAGTGTCCTTGTTTATGTCACTCATGCCGAGAAGCACGGCGTACAAGTGATAGGAGATTTGAAGAAAGGGCTCAATCCACCTTCAGCCACGGATTTGGTGTTTGTGTCGCCTTACATGGGCACGGCAATCAAAACTGGATTTGTCACCGGCATTATAGCGCTGGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAGCATTACCATATAGATGGCAATAAAGAGATGATAGCCTTTGGGACCATGAACATTTTTGGTTCCTTCACCTCTTGCTACCTCACAACAGGACCATTTTCTCGTTCTGCTGTGAACTACAATGCTGGGTGCAAAACTGCAGCATCAAACATCATAATGTCAATTGCAGTGATGTTGACATTGTTATTCCTCACACCCTTGTTCCATTATACCCCTTTGGTGGTGCTATCAGCCATTATTGTATCTGCAATGCTTGGACTCATAGATTATCAAGCAGCCATTCATTTGTGGAAAATTGACAAATTTGATTTCTTGGTGTGCATCAGTGCATATATTGGAGTAGTCTTTGGCAGTGTTGAAATGGGTTTAGTAATAGCAGTAGCAATATCTCTGCTTCGAGTACTCTTATTTGTTGCAAGGCCAAGGACATTTGTTCAAGGAAACATTCCAAATTCTGCAGTATATAGAAATGTGGAACAATATCCAAATGCACACCATGTTCCTGGAATCCTAATTCTTGAAATTGATGCACCAATTTACTTTGCCAATGCAAGCTACCTAAGAGAGAGGATCACAAGGTGGATTGATGAAGAAGAAGAAAGAATTAAAGCTACAGGGAAGACCAATTTGCAGTATGTTATAATGGACATGACTGCTGTTGGTAACATTGATACAAGTGGAATAAGCATGCTTGATGAGTTCAAGAAAAGTGTTGACAGAAGAGGGCTACAACTTGTTCTGGTCAACCCTGGGGGTGAGGTGATGAAGAAGCTAAACAAATCAAAGTTCCTTGATGAAATAGGCCATACATGGATATACCTGACAGTTGAAGAAGCTGTTGAAGCATGCAATTTGATGCTTGATGCTCACAAATCAAAACCCATGAAAGATGAAAAATCTGAAGGTTGGAACAGTGTGTGA 1971 0.446 MGNADCASTMNVEGVAHRVAVPPPVPFFKSLKNSMKETFFPDDPLKKFKNQPASKRVVLGLQHFFPILEWAPRYNVQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLVYAMMGSSRDLAVGTVAVGSLLMASMLGREVNPNDNPKLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFSQTHQWRWESAVLGCCFIFFLLVTRYFSKQRPKFFWVSAMAPLTSVVLGSVLVYVTHAEKHGVQVIGDLKKGLNPPSATDLVFVSPYMGTAIKTGFVTGIIALAEGIAVGRSFAMFKHYHIDGNKEMIAFGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCISAYIGVVFGSVEMGLVIAVAISLLRVLLFVARPRTFVQGNIPNSAVYRNVEQYPNAHHVPGILILEIDAPIYFANASYLRERITRWIDEEEERIKATGKTNLQYVIMDMTAVGNIDTSGISMLDEFKKSVDRRGLQLVLVNPGGEVMKKLNKSKFLDEIGHTWIYLTVEEAVEACNLMLDAHKSKPMKDEKSEGWNSV* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1098 656 PANTHER SULFATE TRANSPORTER 6 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja1g1098 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 6 653 - -
Lja1g1098 656 TIGRFAM sulP: sulfate permease 66 629 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja1g1098 656 Pfam STAS domain 511 629 IPR002645 -
Lja1g1098 656 ProSitePatterns SLC26A transporters signature. 108 129 IPR018045 GO:0008271|GO:0008272
Lja1g1098 656 CDD STAS_SulP_like_sulfate_transporter 511 626 - -
Lja1g1098 656 ProSiteProfiles STAS domain profile. 510 633 IPR002645 -
Lja1g1098 656 SUPERFAMILY SpoIIaa-like 512 633 IPR036513 -
Lja1g1098 656 Pfam Sulfate permease family 79 459 IPR011547 GO:0016021
Lja1g1098 656 Gene3D STAS domain 505 638 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1098 Lja-Chr1 10963819 10972754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1098 17 656 Inorganic Solute Cotransporters AT4G02700 67.551 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1098 K17471 - gmx:100804670 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1098 1 10963819 10972754 Lja1g1098 1 10963819 10972754 ECH
Lja1g1098 1 10963819 10972754 Lja5g1947 5 24397904 24405657 PCT