Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1085 ATGAGTCTGGAAAAGAATCCGCTTGTATTTTTTGATGTTTCGATTGATGGGGATCCCGTGGAAAGAATTGTTATTGAGCTTTTTGCCAGTGTAGTTCCAAAGACAGCCGAGAATTTCCGGGCGCTTTGCACAGGTGAGAAGGGCATTGGAAAATCAACTGGGAAACCTTTGCATTATAAAGGAACATCCTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTCTCAAGGGGTAACGGCACAGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCATACTAAAACATGATGGACCTGGTTTTCTTTCTATGGCTAATAGTGGTCCTAATACAAATGGATCTCAGTTTTTTATCCTATTCAAGCCCCAGCCTCATCTTGATAGGAAGCATGTTGTTTTTGGAAAAGTTGCCAAGGGTTTGGAGATTCTGAAGAAAATTGAGCAGGTGGGAACATCTGATGGGAAACCTGCCCAGCCAGTTAAAATTATCGATTGTGGTGAAATCGCTAAAACTAAAATTCAGCATCAAGTCGAGAAGGAGAAGGAGAAAGGGAAACAGAGAAAGTCTGTGAAATCCTTGACTTCTGATGATAGTTCCGACAAAAAATCAAGAAGAAAAAGAAAAAAATCTTCCAAAGACTCAAGGAAGAGGAGGAGGAGATACTCATCATCCGATAGTGATAGTGATACCGGTAGTGATAGTTATTCCTCAGACTCTGAGTCAGATTCAGCTTCAGATTCTGAATCAGATTCATCAGATTCTGATTCAAGTTCCTCTAAACATGGGAAACACCTGAAAAGGAAGAGAAGTAAGCGTAAGCATGGGAGGAAGACGAAAACTGGACGAAAGCAGAGCAGGAGAAGCCAACATAGTAGAACTAAAAGATCAAGAAGAAAGTCCAAATGGAGTTCTGAAGGTTCAAGTGATACAGAAAGTGAGAGTTCTACTGCTAGTGATAGTAGTTCTGGTGATGAGAAAGCTGATCGTCGTGTCTCTGGTCGTAAGACAGATGCTGACAATAAAGCTAAAAAAAATATAGACTTGAGAAAGCAATCGTCTAGCCTTCCCCTACGAATTCAAACTATTCCAGAACAGGAAATAGATCCGAAGGTTAGAACTGTGGACAAGCAATCACATGAAGAAGGGGAAATGTCTCCAGAAAATGGTACATTTGTGAATAATGGGCATGAGACTCGAGCAGAATTAAGTAAACCTGCCAAGCAACATGCTTATTCAGATGATTCAAACCACAATAGAGTTGCAAGGTCTGGAAGAAGTCCTGTTAGTCCTACCAGGAATTCTGGGGAGCGAAACCAAGAACATACTTTGTTGGCTAGTCCTGGCCAAAAAGCACCTGAACCTGCCTCCAAGCATGGTCAGGGATTTACAAAAAGCCCCTCACCAAATGGCATGCCTAAGCGCGTTAAAAAAGGACGTGGCTTTACTGAGCGCTATGCCTTTGTACGCAAATATCGTACTCCATCTCCAGAGAGGTCTCCCCGTCCATATCGATATGGTGATAGAAATATCAGAAGGAACTTTGACAGAAATCCAAGTTCCAGAGGTTATTCTGAGCGCTCACCACCGCCTAGACGGTTTCGAAGCCCACCAAGAGGCCGTCCAAGATACCCAAGCAGAAGAAGTCGGAGTAGGAGCATCTCCCGCAGTCCAGTGCGTGGCCGTTTTAGAGATCGTGGCCGGAGCAGGAGCCGAAGCCCAATACGCAGCCCTAGTCCAGGAGACAGGCGGCGGCCTTCCATGAGTGACAGACTAAAATCACGGCTTGGTTCTCGTGATAAAAAATCTCCGGACAGAAGGGGGAGATCAAAATCCAATTCTAGGAGCAATGGCTCTTCTCGCTCTAGATCCCCTGACGCTACACCACCAAAGCGTCATGACAAAAGAACTTCCATATCCCGTAGCAGGTCTAGATCAAGCTCTCCATCTGGCGGACAGAAGGGTTTGGTTTCTTATGGAGATGCTAGTCCTGATTCTGGGGCTAGGTAA 2028 0.4408 MSLEKNPLVFFDVSIDGDPVERIVIELFASVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGFLSMANSGPNTNGSQFFILFKPQPHLDRKHVVFGKVAKGLEILKKIEQVGTSDGKPAQPVKIIDCGEIAKTKIQHQVEKEKEKGKQRKSVKSLTSDDSSDKKSRRKRKKSSKDSRKRRRRYSSSDSDSDTGSDSYSSDSESDSASDSESDSSDSDSSSSKHGKHLKRKRSKRKHGRKTKTGRKQSRRSQHSRTKRSRRKSKWSSEGSSDTESESSTASDSSSGDEKADRRVSGRKTDADNKAKKNIDLRKQSSSLPLRIQTIPEQEIDPKVRTVDKQSHEEGEMSPENGTFVNNGHETRAELSKPAKQHAYSDDSNHNRVARSGRSPVSPTRNSGERNQEHTLLASPGQKAPEPASKHGQGFTKSPSPNGMPKRVKKGRGFTERYAFVRKYRTPSPERSPRPYRYGDRNIRRNFDRNPSSRGYSERSPPPRRFRSPPRGRPRYPSRRSRSRSISRSPVRGRFRDRGRSRSRSPIRSPSPGDRRRPSMSDRLKSRLGSRDKKSPDRRGRSKSNSRSNGSSRSRSPDATPPKRHDKRTSISRSRSRSSSPSGGQKGLVSYGDASPDSGAR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1085 675 MobiDBLite consensus disorder prediction 314 328 - -
Lja1g1085 675 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lja1g1085 675 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Lja1g1085 675 MobiDBLite consensus disorder prediction 329 355 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 375 390 - -
Lja1g1085 675 CDD cyclophilin_ABH_like 7 173 - -
Lja1g1085 675 Gene3D - 1 182 IPR029000 -
Lja1g1085 675 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 422 - -
Lja1g1085 675 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Lja1g1085 675 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lja1g1085 675 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lja1g1085 675 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lja1g1085 675 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lja1g1085 675 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lja1g1085 675 MobiDBLite consensus disorder prediction 540 563 - -
Lja1g1085 675 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 422 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 407 427 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 483 526 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 428 452 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 181 210 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 234 249 - -
Lja1g1085 675 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Lja1g1085 675 MobiDBLite consensus disorder prediction 181 675 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 564 618 - -
Lja1g1085 675 MobiDBLite consensus disorder prediction 268 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1085 Lja-Chr1 10807955 10813634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1085 25 171 U-box Gene Family AT5G67530 48.322 2.03e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1085 K09566 - qsu:112034236 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1085 1 10807955 10813634 Lja1g1085 1 10807955 10813634 ECH