Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1084 ATGGGGTTCGGAGATCAGAAGCTAGAAAAACAAATCGGCAAACAGGTGGGGTGCATGACCGGTTTCCTCCACATCTTCGACCGCCACGCCGGAAAACGCATCTCCTCCGCCAAACGACTCCCTCCTCCACCGCCTCCGGAAACACACGGCGCCTCTCCGCCGGAATCATCCAAACCGGAAACACAGAACGAACCTCCGAAGACGCAGACGCCATGTCCCCTTCCGGTTCTCGAATTCAAGGAAGCCACGACGACGAGAAAATTCTCCAAAGAAGCTCCGAGACTATCCTTAGATAGCAGAGCCATCGTGGATGCCAGAGGAAGCTTCCACCCGAGAGAGGTGGAGAAGCAGCGACGATCCACCAGCGTCGTTGCTAAGCTCATGGGGCTGGAGGATTCGGATTCCGATTCCGACCCGGAGCTTCGAAGATCCGCTTCTGAATCCAGGATTCCCAAAGAAGATCTGGTTCTGCCGAAACCACAGTATCGTTTCTTCGACACCACAAATTTCCAGTTAAAGCAATTGCAGAACCACCATGTTGATAAACGAGCATCAGATCCAAACGCGAGGGGAATGATGAGACAGAAGAAGAGTTTCTTCGATTCCGCTGATTTTTTCCCTGGAACGAAACAGAGTGTTTCTGTTGTTCATGGAGAGATTGAAAGGAGGTTGAAGATGCGAGGGATCGATGAGCCTTCCAAGGATCTCGATGCTCTTAAGCAAATCCTGGAAGCGTTGCAGCTCAAAGGCCTCCTCCATTCCAAAAACTCAACGCTTCCGTTGAACCACCGGAACTTCGTCTACGACGGAACGTTCTCGTATAACGATTCTCCGATTGTTGTCATGAAACCTGGAAGATCTTCTGGTTCTTTGAATCAAACCAGATTCACCGGGAACGATTCTCCACCGGCATCTGCATTCCGGTCGAGGCAAGAACCGGGTCGAAATGTGAAGAGCAGAAACCCGAACTCGCCAACTCACAGCCCGAACCGGATGAGGAAGGGGACAATTACAAACGCGGAGAAGCAGAGAAAAGTGAACGACGGTGGTGATCGGAAAAGGACTAGTCCGGTTCATTCTCCCCGGGTGAACTCCAGACTCAATGGACCGGACCGGCAAGCAACCTCCCGGTCGCCGAGGATGAGACAAACAAACCGTTACCAGAAGGAGGAGAAGGCCGTGCCCGTGGTTGTGGCCACCGCGGAGGACGCATCATCCACCGTTTCCGATAGCAGTTTCAGCACATCTTCATACACTGATACAGAGAGGTTGAAGGTGGAGGATCCGTACAGGGAAGGGAAGAATCTACTCCGGAGGTGTGATAAGTTACTGAACAGCATAGCAGAGCTACAACCGAGTCCGGTATCGGTGCTTGATTCATCAGTTTACAGGGATGATTCGTCGTGTTCACCTTCACCGGTGACGAAGCGGTGCATTGATTACAGAGATCAAACCGAGTTTGAAGATGATGTGTGGAGCGCAGATCTGTATTGCAGTGAAGCCAATTTCGAAGATCGCGATTTCAATTATGTTTCTGAGATACTCCGTGCTTCTAATCGCTTACCGGAAAACAGCAACGTGTTTTTGTTTCTGGAGAAGCAGCAGAGCCTCAGGGGAAACGAGAACAACACTTCCAAAGCCTCCACTCTCCAGAGGCGGTTAATCTTCGACACGGTTCACGAGATTCTCAATCGGAACCGCCGTCTGCCGCCATGGAGGGTGGATAACGCGCCGTTGCTACGTCGGATCTGGCCGGAGTTTGTGAGGATCCGGGAGAGGGAAGTCTCATCGGAGGACATGTTCGAAGTGATATGCGGGTTGTTGAGGAAGGACATGGCGGAGGAGAGCACCACCGTGAATGAATGGGGAGAATCTCCGGTGGAGATCGGGGATATGGTGCTGGACATCGAACGGTTCATATTCAAAGATCTCATCGGCGAAACCATTCGAGATCTGGCTTCGTTTAAAGGAAAACGTAACAGAGTCTCAGCACTTCGCAGGAAGTTGGTGTTTTGA 2016 0.5159 MGFGDQKLEKQIGKQVGCMTGFLHIFDRHAGKRISSAKRLPPPPPPETHGASPPESSKPETQNEPPKTQTPCPLPVLEFKEATTTRKFSKEAPRLSLDSRAIVDARGSFHPREVEKQRRSTSVVAKLMGLEDSDSDSDPELRRSASESRIPKEDLVLPKPQYRFFDTTNFQLKQLQNHHVDKRASDPNARGMMRQKKSFFDSADFFPGTKQSVSVVHGEIERRLKMRGIDEPSKDLDALKQILEALQLKGLLHSKNSTLPLNHRNFVYDGTFSYNDSPIVVMKPGRSSGSLNQTRFTGNDSPPASAFRSRQEPGRNVKSRNPNSPTHSPNRMRKGTITNAEKQRKVNDGGDRKRTSPVHSPRVNSRLNGPDRQATSRSPRMRQTNRYQKEEKAVPVVVATAEDASSTVSDSSFSTSSYTDTERLKVEDPYREGKNLLRRCDKLLNSIAELQPSPVSVLDSSVYRDDSSCSPSPVTKRCIDYRDQTEFEDDVWSADLYCSEANFEDRDFNYVSEILRASNRLPENSNVFLFLEKQQSLRGNENNTSKASTLQRRLIFDTVHEILNRNRRLPPWRVDNAPLLRRIWPEFVRIREREVSSEDMFEVICGLLRKDMAEESTTVNEWGESPVEIGDMVLDIERFIFKDLIGETIRDLASFKGKRNRVSALRRKLVF* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1084 671 MobiDBLite consensus disorder prediction 316 336 - -
Lja1g1084 671 MobiDBLite consensus disorder prediction 286 306 - -
Lja1g1084 671 MobiDBLite consensus disorder prediction 337 358 - -
Lja1g1084 671 MobiDBLite consensus disorder prediction 129 152 - -
Lja1g1084 671 Pfam Domain of unknown function (DUF4378) 507 647 IPR025486 -
Lja1g1084 671 MobiDBLite consensus disorder prediction 284 393 - -
Lja1g1084 671 PANTHER LONGIFOLIA PROTEIN 4 671 IPR033334 GO:0051513
Lja1g1084 671 MobiDBLite consensus disorder prediction 33 75 - -
Lja1g1084 671 PANTHER OS11G0587300 PROTEIN 4 671 - -
Lja1g1084 671 MobiDBLite consensus disorder prediction 360 382 - -
Lja1g1084 671 MobiDBLite consensus disorder prediction 38 52 - -
Lja1g1084 671 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1084 Lja-Chr1 10796718 10800407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1084 415 671 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 46.494 1.60e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1084 - - lja:Lj1g3v4449210.1 1290.02