Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1067 ATGGATCTTGCTGACTCTGCATCACTGGAACTTCAAGCTCCTTCTGCTGTAACGAAGAAAACTGCTGTTTTCAGAAGCTGGATTCTGCTAAACCATGACGGCGTAGCCACTCTTCTAGATGTAGACAAGTATGCTATTATGCGCCTGGTTGAAATCCATGCAAGAGACCTTCGAATTCTCGACCCTCTTCTCTCATATCCTTCCACCATTCTTGGCAGAGACAAAGTCATTGTTCTCAATTTAGAGCACATAAAAGCTATTATCACTGCAGAAGAGGTGTTGCTTAGAGACCCTATGGATGATGATTTGATGCCGGTTATTGAAGAACTTCGGCGGCGGTTACCGATAGCAACTGCTGCTGGCCAAGGCCAAGGAGAAGAAGACACGGTTGCTCAAGATGGTGAAAGTGGAGAAGAAGATGAGTTTCCATTTGAGTTCCGGGCCTTAGAAGTTGTGTTGGAGGCAATTTGCAGCTTCCTTGACGCAAGGACAAGAGAGTTAGAATCTGCTGCTTATCCAGCTTTGGATGAACTCACCTCCAAGATCAGCTGTCGTAATTTGGATAAAGTGCGAAAATTGAAAGGTGCAATGACAAGGTTAACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGATGACGATGATGACATGGCTGAACTTTACTTATCAAGAAAGTTTGCTGCTTCATCCTCTCCCACAAGTAGCTCTTGTGATCCCAAATGGCTTCATAGCTCCCCAAATCCAGATTCAGAGATACATAATATATCAAATAAAACAAGTACAACAACAGTTGAAGGAGATAATGATGTTGAGGAGCTCGAAATGTTACTTGAGGCCTATTTCATGCAAATTGATGGAACATTAAACAAACTGAAAACAGTATGA 897 0.4214 MDLADSASLELQAPSAVTKKTAVFRSWILLNHDGVATLLDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGRDKVIVLNLEHIKAIITAEEVLLRDPMDDDLMPVIEELRRRLPIATAAGQGQGEEDTVAQDGESGEEDEFPFEFRALEVVLEAICSFLDARTRELESAAYPALDELTSKISCRNLDKVRKLKGAMTRLTNRVQKIRDELENLLDDDDDMAELYLSRKFAASSSPTSSSCDPKWLHSSPNPDSEIHNISNKTSTTTVEGDNDVEELEMLLEAYFMQIDGTLNKLKTV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1067 298 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 297 IPR039204 -
Lja1g1067 298 Gene3D Magnesium transport protein CorA, transmembrane region 105 298 - -
Lja1g1067 298 MobiDBLite consensus disorder prediction 118 137 - -
Lja1g1067 298 Gene3D - 11 98 - -
Lja1g1067 298 MobiDBLite consensus disorder prediction 233 268 - -
Lja1g1067 298 Coils Coil 190 217 - -
Lja1g1067 298 CDD Mrs2_Mfm1p-like 27 298 IPR039204 -
Lja1g1067 298 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 15 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1067 Lja-Chr1 10645992 10650494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1067 15 295 MRS2 Gene Family AT5G09690 64.311 1.73e-115 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1067 K16075 - gmx:100799368 412.535