Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1061 ATGGGTGCAAATCTTGGATATAACAATGGATTCCCATCCATGACCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGTTGCATAATGTCCCTCCAGCTATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAATGGGCAGATAGCAGTAATGATGCTTACTCGGCTGCTGCCATTAAAGCTGGTCCCTGTAGCTTGCCAGGGGCCAGAGGAAGTTTTGGGGGTCAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTATCGAGACGACATGACTATGCCTGGTGATGTTTTCCTCTTGCAACTTTGCAGTGGAGTGGATGAGCATGCAGTTGGCACCAGTGCAGAACTTGTTTTTGCTCCAATAGATGCGTCTTTCTCTGATGATGCACCCATTTTACCTTCTGGTTTTCGTATTGTACCTCTTGATTCTGGCACGGATGCTGCTAGTCCAAACCGGACACTTGATCTTGCCTCATCACTTGAGGTTGGAACCACAGCAAACAAAGCTGCTGGTGCCAATTCAGGTCATTCTGGAAGCACAAAATCTGTGATGACAATAGCATTCCAGTTTGCATTTGAAGTCCACCTTCAAGATAATATAGCAACTATGGCCCGACAATATGTGCGTAGTATTGTTGCATCTGTTCAGAGGGTTTCCTTAGCACTTTCTCCTTCGCGCTTCGGTTCTCAAAGTGCTTTTCACTTACCACCTGGTACTCCTGAGGCTCAAACACTTGCTCGGTGGATCTGTAACAGCTATAGGTATGGCAGTTGA 783 0.4623 MGANLGYNNGFPSMTSSVLCAKASMLLHNVPPAILLRFLREHRSEWADSSNDAYSAAAIKAGPCSLPGARGSFGGQFMEVIKLENMGYYRDDMTMPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIVPLDSGTDAASPNRTLDLASSLEVGTTANKAAGANSGHSGSTKSVMTIAFQFAFEVHLQDNIATMARQYVRSIVASVQRVSLALSPSRFGSQSAFHLPPGTPEAQTLARWICNSYRYGS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1061 260 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 257 - -
Lja1g1061 260 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 257 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1061 Lja-Chr1 10595631 10597255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1061 1 257 Homeobox Transcription Factor Family AT4G32880 66.790 1.48e-120 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1061 K09338 - lja:Lj1g3v4468020.2 492.271