Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1059 ATGGGAGATCTGCAGAAAGATTATGATGGCAAGCCCAGCTTTACTCAGATCATCCTAGCCATATTTGTTGGGTTGATATTTGCTATAGCCTTGCATTATCGCCTGAAGCAGATAAGAGATCAAAAGATCATCCCACGTGTAAGATTATCACGCCAAGGCCACCACACCCCAAAGCTTGAAAGGTTCTCCCATTACGTAGCTAGGCAAATGGGGTTCAACGATAGGAGGATGTGTCCTCATCTATGTAGATTGGCTTCTGAATACATAAGGAAATGCGAGGGATGTGAAGATGATATATACGCCTTCTTCGAGAGGGAGCCAGATGCGGATTCACTCTATGTGAAGCTGGTGGAGGAGTTTGAGAGATGCATTCTGAGTTACTTTGGATTCCATTGGAACCATGGTGATATAATGATAAGTCAGGTGTTGAGCTCGGAACTTGAGCCAAAAAAGAAGCTCAAGCACATAGTTATGGCGGCAACCAGGGAACAAAGGTTCGAGAGAGTTGCCAAGAACCTGAAGGTGGCCAGTGTTTTTAACACATTAGTGGAAGAGATGAAAGCAATGGGGGTTGCAGTCAATGATGACTCTCAGTGTACAGAGGTGATGGCTCCTGTAGCTCACAGCGATAGAAGCCCAGTGCTCCTCCTCATGGGCGGAGGTATGGGGGCTGGAAAGAGCACCGTCCTCAAGGATATTCTCAATGAACCTTTCTGGGCAGGAGCAGCAGGTAATGCCGTAGTCATCGAGGCAGATGCCTTCAAAGAATCAGATGTCATATATAAGGCCCTTTGTTCAAGAGGCCATCACGACATGATTCGAACAGCAGAACTGGTACATCAATCATCCACAGATGCAGCCTCATCCCTCCTGGTAACAGCACTTAATGAGGGACGGGATGTAATTATGGACGGCACACTCTCCTGGGTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGCTACCGCATGGGAGTTGGTTACAGGGTAAATGATGATGGAAGTGTGACTGAAAGCTATTGGGAACGAGTTGAAGATGAAGAACCTGAACAGGTTGGAGGCAAAAAGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTGTGTGATGCTTACCTTGCAGTAGTTAGAGGCATAAGGAGAGCTATTATGTCAAGAAGAGGAGTGAGAGTAAAGTCACAATTGAAATCCCACAAGAGATTTGCTCAGGCTTTTATGACTTACTGTAACCTTGTAGACAATGCCCGACTATACTGCACAAATGCGTTAGAAGGCCCAGCCAAGTTGATAGGATGGAAAGAGAGAGACAGGACACTGCTCGTTGATCCAGATGAAATTGCCTGTTTGAAGAGGGTTGCAAAGTTGAATGACGACGCCAATTCCATTTATGAACTTTACAAGCACCCAAATCCAGCTTATGAAGTTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTAAATATCCAACAGGAGCTCAAGTTTTCAATCCAAAAAATTGAGAGCTCGAAATGA 1539 0.4516 MGDLQKDYDGKPSFTQIILAIFVGLIFAIALHYRLKQIRDQKIIPRVRLSRQGHHTPKLERFSHYVARQMGFNDRRMCPHLCRLASEYIRKCEGCEDDIYAFFEREPDADSLYVKLVEEFERCILSYFGFHWNHGDIMISQVLSSELEPKKKLKHIVMAATREQRFERVAKNLKVASVFNTLVEEMKAMGVAVNDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILNEPFWAGAAGNAVVIEADAFKESDVIYKALCSRGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGVGYRVNDDGSVTESYWERVEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMSRRGVRVKSQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKLIGWKERDRTLLVDPDEIACLKRVAKLNDDANSIYELYKHPNPAYEVGSVWKDIVLSPSRLNIQQELKFSIQKIESSK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1059 512 Gene3D - 196 444 IPR027417 -
Lja1g1059 512 PANTHER UNCHARACTERIZED 1 511 IPR044802 -
Lja1g1059 512 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 511 - -
Lja1g1059 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 337 IPR027417 -
Lja1g1059 512 Pfam Zeta toxin 207 320 IPR010488 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1059 Lja-Chr1 10569339 10576128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1059 - - gmx:100794775 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1059 1 10569339 10576128 Lja5g1898 5 23209352 23217489 PCT