Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1057 ATGACTGAGATACTCTCATATCTGCTACTCTTGATTCTCTTGTTCATCTTTCCACTTCTCTTTCTCTTCTTCAAATCTTCTTCTCCTTCTTCACCTACCAATACCAACACCAACACCAACATCACTCTCCCCAAAGCATACCCACTCATCGGTTCCTACCTCGCCGTCAAAGCCAACGCCCACCGCCGCATACAATGGTTCTCTGATCTCGTCCAAATCTCCCCCGCCGCCACCTTCACCTTCCACCGCCCACTAGGCCGCCCCACAATCTTCACCGGCAACCCCGCCACCGTCCAACACATCCTCAAGACCCGTTTTCCCATCTACCAGAAGGGCAGCACGTTCGTAACCACCCTCTCAGACTTCCTCGGCTCCGGAATCTTCAACACCGACGGCGAGAATTGGAAGTTTCAACGACAAGTTGCCAGCCATGAATTCAACACCAAGTCTCTGCGGAATTTCGTCGAACACGTGGTGGACGCTGAACTTTCAAACCGTTTGGTTCCAATTCTCGCCGATTTGGCTGAAAGCAAAACCACCGTTGATTTCCAGGACATTCTCCAACGATTCGCCTTCGACAACATCTGCAAAATCGCATTCGGGTTCGACCCGGAGCATCTCACGGCGTCGGCGGAACGGAGCGAGTTCGCCAGAGCTTACGAAGAAGCAAGCGAAATCAGCTCCAGACGGTTCCGCGGCCCGTTACCGTTGATTTGGAAGATCAAGAGGAAGCTCAACATCGGGTCGGAGAAGAAGCTTCGAGAAGCGGTTAGGGTGGTGCGTGAATTCGCGAAGGGGATTGTGAGAGAGAAGAAGCGAGAACTGGAGAAGAAGGAGGCGGTGGAATCGGTGGATATGTTATCGCGGTTTCTGAAATCGGGTCACTCCGATGAAGATTTCGTGACGGATATTGTGATTAGCTTCATTCTCGCCGGGAAGGATACTACGTCGGCGGCGCTGACGTGGTTTTTCTGGTTGCTGTGGAAGAATCCGAGGGTGGAGGAGGAGGTGGTGAGGGAGATAAGGGAGAAGAGTTCGGAGGAGGGGATGGTGTATGAAGAAGTGAAGGAGATGGTGTACACGCACGCGGCGTTGTGTGAGAGCATGCGGCTTTACCCGCCTGTGGCCATGGACACGAAGGAGGCGGCGGAGGACGATGTTTTACCGGACGGTACGGTGGTGAAAAAGGGGACGCCGGTGACTTACCACGTGTACGCGATGGGGAGGATGCCAAGCTTGTGGGGGGAGGATTGGGCCGAGTTTCGGCCCGAGAGGTGGTTGGAGAGGGAGGATACGAAAACGAATCTTTCACCACAAGAAAAGTGGAAGTTTGTGGCGAGGGATTCGTTTTCGTATCCGGTGTTTCAGGCGGGGCCCAGGATTTGTTTAGGGAAGGAAATGGCGTTTTTGCAAATGAAGAGGTTGGTGGCTGGGATTCTCAGCCGCTTCACGGTGGTGCCGCTGCCGCACCTGGCGGAGGAGCCTAATTTTATTGCCTTTTTGAGTTCTCAAATGGAAGGTGGTTTCCCTGTCACCATCCACCGCAGGATTTCAGATTAA 1560 0.534 MTEILSYLLLLILLFIFPLLFLFFKSSSPSSPTNTNTNTNITLPKAYPLIGSYLAVKANAHRRIQWFSDLVQISPAATFTFHRPLGRPTIFTGNPATVQHILKTRFPIYQKGSTFVTTLSDFLGSGIFNTDGENWKFQRQVASHEFNTKSLRNFVEHVVDAELSNRLVPILADLAESKTTVDFQDILQRFAFDNICKIAFGFDPEHLTASAERSEFARAYEEASEISSRRFRGPLPLIWKIKRKLNIGSEKKLREAVRVVREFAKGIVREKKRELEKKEAVESVDMLSRFLKSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEVVREIREKSSEEGMVYEEVKEMVYTHAALCESMRLYPPVAMDTKEAAEDDVLPDGTVVKKGTPVTYHVYAMGRMPSLWGEDWAEFRPERWLEREDTKTNLSPQEKWKFVARDSFSYPVFQAGPRICLGKEMAFLQMKRLVAGILSRFTVVPLPHLAEEPNFIAFLSSQMEGGFPVTIHRRISD* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1057 519 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PANTHER CYTOCHROME P450 11 513 - -
Lja1g1057 519 SUPERFAMILY Cytochrome P450 41 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 Pfam Cytochrome P450 44 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PANTHER CYTOCHROME P450 94A2-LIKE 11 513 - -
Lja1g1057 519 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1057 519 Gene3D Cytochrome P450 30 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1057 Lja-Chr1 10553992 10555734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1057 4 516 Cytochrome P450 AT5G63450 48.256 1.77e-165 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1057 K20769 K13407 gmx:100818732 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1057 1 10553992 10555734 Lja5g1887 5 22994288 22996061 PCT