Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1046 ATGGGTAGTACTAACTTGCACCAAGTACTTAGAAGCCTCTGTTTCAATTCTGATTGGAACTATGCCATCTTTTGGAAGCTCAAACATCGAGCTAGAATGATGTTGACATGGGAGGATGCTTACTATGACAATCCTAACAATGATGATTCAGAAAATAAGTACAGTCAGAAGACCTTGGAACAGATTGGTGGTGGGAAATTTTCACACGACGCTCTAGGATTAGCTCTGGCAAAGATGTCATATCATGCATATTCATTAGGGGAAGGTATTGTCGGACAGGTAGCTATTACTGGAAAGCATCGGTGGATATGTGCGGATAATCAAGTTCCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGATGGCAGTCTCAGTTTTCTGCTGGAATTAGGACAATCGTTGCTGTAGCTGTAGTCCCACTTGGTGTTGTTCAACTTGGCTCTCTAAATAAAGTGATTGAAGACATGGGGACTGTAACTCATATAAGAAATCAGTTTTTGTCTACTCAAGACTACTCAGTAGGCCATGTTCCTAGTCAAATGCACACTAGCTTGAAGAGTTCTTCGTCTCAGCCAGAAGTATTGAAGGAAAATTTGTCTTCAGATATTATGCATGTTTGCTTACATGATACAGAGAAAACCACGAATAGTGAAAAAGTGGATGTTTTAACGCCCCTTCAATCTTCAGAGAGGAACTATGCACCTCATTCTGCATATGAAAAACTGACTGATATGGCCACGCTTGAGGGGCCTGAATTTCGTAGTGATGAAACCTTTTTGCTTCCGACAATTTCCAATATGATTAATGTGGAGCATCAGGAATTTGAAGAGATGCGACATCTAAATGAGAGGCGGTGTCGAGGGGACAGTAGTGGCTGCAAAAATATGAGTTTGGAATCAGAAAATGCCACATCAGTTTTAAACAATTCTGTTATAAATAACACTAGCTTCAATGCTTTAATACACTCATCAGAAAAAGTCAGTGCTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATACAGTTGTTTGTGAAAGTGATAAGTTGCTTCGTGTGGATGCTGGCCATAATGAAATGTTGAGTTTCACCGCACTTTCTGATGTTAACTCCCAAAAACATACCAAAAAGTCAGAATGTCAAACTGAGCCTTGTGACAAGGATACCTCGTACTTTCAACCCGAGCCTTGTTGCAAGGATACCTCGTACATGATGTCAAAGTTCCCTGCTGGGTGTGAACTACATGAAGCACTTGGACCAGCTTTTTTGAAAGGGAGTAAATGTTTTGATTGGCTGGCTCAGGTTAATCAGGACATGAAAACTGTTGATATGCCAGATGAGATTAGCACGAGTCAATTGACTTCTGAATCTCGTCCAGAACATCTTTTGGAAGCAATGGTGGCCAACATTAGCCATAGTAATAATGATAATAATGGTGAATTATCATTTTGTACATCAATGCAATCCGCAATGACTTCTGGAAAAAATCCTGAAGCTTCTCTTCATAATGTGCATAGTGTTAATTCAAAAGCATATTCAATAGATCATCCCTCTCTCTTAAGAGAGGACAAGCACCATTCTTTGAGTTCTTCTACATGTCCCGGTTCATATAGCGAACAGTTTGAAAGGTCCTCTGAACCTTCTAAGAACAGCAAGAAGAGGGCTAGGCCGGGCGAAAGTTGTAGGCCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGTATTAAGGATTTGAGAGAGCTGGTGCCTAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCGCAATAAAGCACATGCTATTTCTCCAAAGCGTAACCAAGCACGCTGACAAGCTAACTAAATTCGACGATACTAAATCAAAGTTGCATCGCATGGAAACAGACGTTATTGGAACCTCTACTTATGAGCAGGGTTCAAGTTGGGCAATGGAGGTTGGGGGTCCTTTGAAAGTTCATTCAATATTGGTGGAGAATCTTAGCAAGGATGGACAGATGATTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGACGTGATAAGAAGCTTGGGCCTTACAGTTTTGAAGGGTGCAACAAAAGCTCATGATGAGAAGATATTGTTATGCTTTGTTGTTGAGGGCCAAAACAACAGAAATGTACACAGACTGGATATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGCACAATGCATGCACAATAA 2223 0.4121 MGSTNLHQVLRSLCFNSDWNYAIFWKLKHRARMMLTWEDAYYDNPNNDDSENKYSQKTLEQIGGGKFSHDALGLALAKMSYHAYSLGEGIVGQVAITGKHRWICADNQVPGSGLSFEFADGWQSQFSAGIRTIVAVAVVPLGVVQLGSLNKVIEDMGTVTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDTEKTTNSEKVDVLTPLQSSERNYAPHSAYEKLTDMATLEGPEFRSDETFLLPTISNMINVEHQEFEEMRHLNERRCRGDSSGCKNMSLESENATSVLNNSVINNTSFNALIHSSEKVSADSACFPSVFLDTVVCESDKLLRVDAGHNEMLSFTALSDVNSQKHTKKSECQTEPCDKDTSYFQPEPCCKDTSYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKTVDMPDEISTSQLTSESRPEHLLEAMVANISHSNNDNNGELSFCTSMQSAMTSGKNPEASLHNVHSVNSKAYSIDHPSLLREDKHHSLSSSTCPGSYSEQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKDLRELVPNGAKCSIDSLLERAIKHMLFLQSVTKHADKLTKFDDTKSKLHRMETDVIGTSTYEQGSSWAMEVGGPLKVHSILVENLSKDGQMIVEMLCEECSHFLEIADVIRSLGLTVLKGATKAHDEKILLCFVVEGQNNRNVHRLDILWPLVQILQSKSTMHAQ* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1046 740 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 554 603 IPR011598 GO:0046983
Lja1g1046 740 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 4 739 - -
Lja1g1046 740 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 567 609 IPR036638 GO:0046983
Lja1g1046 740 MobiDBLite consensus disorder prediction 528 543 - -
Lja1g1046 740 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 166 IPR025610 -
Lja1g1046 740 MobiDBLite consensus disorder prediction 522 567 - -
Lja1g1046 740 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 4 739 IPR043561 GO:0003700|GO:0006355
Lja1g1046 740 MobiDBLite consensus disorder prediction 544 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1046 Lja-Chr1 10423505 10430085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1046 1 735 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.981 6.68e-156 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1046 - - ccaj:109796613 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1046 1 10423505 10430085 Lja1g1046 1 10423505 10430085 ECH