Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1039 ATGGCCAAGGAACAAATTCAGGTGCTAAATGCGCTTGATGTGGCGAAAACACAATGGTACCATTTCACTGCAATTGTAATTGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACCAAGTTGCTCGGTCGCATTTACTACCACGTTGATGGCGCTGCGAAGCCCGGAACATTGCCTCCAAATGTATCAGCTGCTGTAAATGGAGTAGCTTTCTGCGGTACACTTTCAGGACAGCTTTTCTTTGGCTGGCTTGGTGACAAATTGGGCAGAAAAAAAGTCTATGGCATGACCCTCATGATGATGGTCATATGCTCTATTGGTTCCGGCCTTTCGTTCGGACATAGTCCAAAATCTGTGATGGCAACACTTTGCTTCTTCAGGTTCTGGCTTGGTTTTGGAATTGGTGGAGACTACCCCCTTTCTGCTACCATTATGTCTGAGTATTCGAATAAGAAGACTCGCGGCGCCTTCATCGCTGCGGTCTTTGCTATGCAGGGTTTTGGAATTCTTGGAGGTGGTATATTTGCAATCATAATTTCTGCTGCATTCAAGGCCAAGTTTGATGCTCCGCCTTATGAGGTTGATCCGGTTGGTTCAACTGTTCCTCAAGCTGACTATATTTGGAGGATAATTGTGATGGTTGGAGCACTCCCAGCTGCATTGACTTACTACTGGAGGATGAAGATGCCGGAAACCGCTCGCTATACTGCTCTAGTTGCCAAGAACACAGAACAGGCTGCAAAGGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCTGAGCCAAAAGGTGACCAAGCACAGGCCAATACATTTGCCTTGTTCTCAAAGGAGTTCATGCGCCGCCACGGATTGCATCTTCTCGGCACAGCAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAAAAAGACATCTTCAGTGCAATTGGTTGGATTCCTCCTGCAAAAACCATGAATGCTCTTGAGGAAGTTTACAGAATTGCAAGAGCTCAGACGCTTATCGCTCTCTGCAGTACTGTCCCTGGCTACTGGTTTACAGTGGCTCTCATAGACAGGATTGGAAGATTTGCTATTCAATTGATGGGGTTCTTCTTCATGACTGTTTTTATGTTCGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGAGAACAGAATAGGATTCGTGGTGATATATTCCTTGACTTTCTTCTTCGCGAATTTCGGGCCTAATGCCACCACATTCGTCGTGCCGGCCGAGATTTTCCCGGCTAGATTCCGGTCCACTTGCCACGGAATTTCATCAGCGGCCGGGAAGCTCGGGGCTATAGTCGGAGCATTCGGGTTCTTGTACCTGGCACAGAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAACTCACTGCTTTTGTTAGGTGTGGTCAACATTTTAGGCTTCTTTTGTACTTTCTTGGTGCCTGAGGCAAAGGGAAAATCTTTGGAGGAAATGTCAGGTGAGAATGAAGAGGAAGGTGAAAATGGAACCAAAGAAGAGTCAGAGCCACATTCTTACAGCACCAGAACAGTTCCATATGTTTAG 1620 0.4623 MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGMTLMMMVICSIGSGLSFGHSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIISAAFKAKFDAPPYEVDPVGSTVPQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTEQAAKDMSKVLQVEIQAEPKGDQAQANTFALFSKEFMRRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVALIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNSLLLLGVVNILGFFCTFLVPEAKGKSLEEMSGENEEEGENGTKEESEPHSYSTRTVPYV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1039 539 MobiDBLite consensus disorder prediction 506 539 - -
Lja1g1039 539 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
Lja1g1039 539 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Lja1g1039 539 TIGRFAM 2A0109: phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lja1g1039 539 CDD MFS_PhT 25 503 - -
Lja1g1039 539 Pfam Sugar (and other) transporter 25 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja1g1039 539 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 522 - -
Lja1g1039 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Lja1g1039 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1039 Lja-Chr1 10327555 10330593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1039 1 519 Inorganic Solute Cotransporters AT3G54700 84.586 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1039 K08176 - gmx:100819445 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1039 1 10327555 10330593 Lja1g1039 1 10327555 10330593 ECH
Lja1g1039 1 10327555 10330593 Lja6g0059 6 1135050 1138465 PCT
Lja5g1860 5 22117570 22119466 Lja1g1039 1 10327555 10330593 PCT