Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0978 ATGAGGCGGCGCCCTGTGGCGGGCCTTCTCCCCGACCAGATGGAGAAATCAACGGCCAAGTACCACAACTCCCGAATCTGCTTCCTCGCTTCACTCTCCGCTTTCTTCTGGTTCTTGCTCCTCTACTTCCACTTCGTCCAAGAACAAACCAGAAAGAGCATTGGGTTTCCTGATTTGAAGGAAGAACAAGAATCCCCTGAGGAGAAAATTTTCCCGTTTACGAGGGCGTTAAGAACTGCTGAAAACAAGAGTGATCCATGTGGTGGGAGGTATATTTATGTACATGATCTTCCTTCCAGGTTCAATGAGGACATGTTGAAGGAATGCAAGAGCTTGAGCAAGTGGACCAACATGTGCAAGTTCACAACCAATGCTGGTCTCGGTCCACCTCTTGAGAATATTGATGGGGTTTTCTCTGATACAGGGTGGTATGCTACTAACCAGTTTGCTGTTGATGTGATTTTCAGTAATAGGATGAAGCAGTATGAGTGTTTGACGCGTGATTCGTCGATTGCTGCTGCGATTTTCGTGCCTTTCTATGCTGGGTTTGATATTGCAAGGTATCTGTGGGGTTCGAATATAACGATGAGGGATTCGGCTTCGCTTGCTCTGGTTGATTGGCTCATGAAGAAGCCTGAGTGGGGGATCATGAATGGGAGGGACCATTTTCTTGTTGCTGGGAGGATTACTTGGGATTTCAGGAGGTTGAGTGAGGAGGAATCGGATTGGGGGAACAAGCTTCTGTTCTTGCCTGCTGCTAAGAATATGTCAATGCTTGTGGTGGAGTCAAGTCCTTGGAATGCAAATGATTTTGGGATTCCTTATCCTACCTACTTCCACCCTGCAAAAGATGAGGATGTGTTCAATTGGCAGGATAGGATGAGGGGGTTGGAGAGGAAGTGGCTATTCTCATTTGCGGGGGCGCCGCGTCCTGATAACCCCAAATCAATAAGGGGTCAGATAATTGAGCAGTGCAGGAGTTCCAAGGTGGGGAAGCTGCTGGAGTGTGATTTTGGGGAAAGCAAGTGTCATTCCCCCAGCAGCATAATGCAGATGTTTCAGGGCTCGCTTTTCTGCCTTCAACCGCAGGGCGATTCCTACACACGAAGATCTGCTTTTGATTCCATGCTGGCTGGTTGTATACCTGTTTTCTTCCATCCGGGTTCAGCGTATACACAATACACTTGGCATCTTCCTAAGAATTACACCAAGTATTCGGTCTTTATTCCCGAGGATGATCTTCGGAAGAGAAAGATCAGCATAGAGGAGAGGCTTAGCCAGATACCTCAAGAACAAGTGAGGATGATGAGAGAGGAGGTCATTAGCCTCATTCCTAGACTTGTGTATGCCGATCCTCGCTCTAAGCTAGAGACTTTAAAAGATGCATTTGATGTTTCTGTACAAGCAGTGATTGACAAGGTGACCAATTTGAGGAAGGATGTGATTGAAGGTCGTGTAGATGAAAACTTTATTGAGGAGAACAGTTGGAAATATGAATTTCTGGATGAGGGACAGCGTGAGGTTGGACCTCATGAATGGGACCCTTTCTTCTCCAAACCGAAGGATGGCGGTGGGGATTCCACACCACCAACACATTCAATGGAGTCCAAACTTCAAATCCTTTTCCTCACCCTTTTCATCTCCTCTCTCACCATCCATGCCCAAACTCTCAGAACTTACATAGTTCAGCTACACCCTCATGGCACAACCACCTCCTTCTTCACCTCTAAGCAAGAATGGCACCTTTCATTCATCCAACAAACCATTTCCTCCGACGAGGACCCTTCTTTGCGGCTCCTCTACTCCTACCGTTCCGCCATGGACGGTTTCGCAGCTCAGCTAACTGATTCTGAGCTTGAGTTCCTGCAGAACTTGCCTGATGTCATCTCAGTTAAGCCTGACAGAAAGGTCCAGATTCAAACCACTTACTCTTACAAATTCTTGGGGTTAAACCCTGCAAGAGAAAACGGTTGGTACCAATCAGGGTTTGGTCATGGAACCATAATTGGGGTTCTTGACACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGACCATGGAATGCCACCAGTTCCTAAGAAATGGAAGGGTGCGTGCCAAGCAGGGCAAGCTTTTAACTCTTCCATTTGTAACAAAAAACTCATTGCTTCAAACAGGTACTTCACCAAAGGCCATCTTGCAGTTTCACCTTCAAGAATTCCAGAGTATCTCTCTCCAAGAGACTCCTCTGGACATGGCACACACACTTCTTCCACAGCTGGTGGAGTTCCAGTGCCAAATGCAGGGGTTTTTGGCTATGCAGAAGGTGTGGCCAGAGGCATGGCCCCTGGTGCCCACATTGCAGTGTACAAAGTTTGCTGGTTCAATGGCTGCTACAATTCTGATATTCTTGCTGCAATGGATGTTGCAATTAGAGATGGTGTTGACATTCTGTCACTGTCTCTTGGTGGATTTCCAGTGCCTTTATATGATGACAGCATTGCCATTGGAAGCTTCAGAGCAATGGAGCATGGGATTTCAGTGGTTTGTGCAGCAGGGAACAATGGCCCATCAGCAATGTCTGTTGCCAATGAAGCTCCTTGGATTAACACTGTTGGTGCTAGCACACTGGACAGGAAGTTCCCAGCTTCAGTTCACATGGGTAATGGACAAGTCCTCTATGGAGAATCCATGTATCCTGCAGCGACGAACCGGGTAAGGAGCAATCATGAAGAGCTTGAGCTTGTTTATCTGACTGAAGGGGATATAGAGAGTCAATTTTGCCTCAGAGGGTCACTTCCAAGGGAGAAAGTTCAGGGGAAAATGGTGGTTTGTGACAGAGGTGTCAATGGAAGAGCAGAGAAGGGTCAAGTAGTGAAGGAATCAGGTGGTGCTGGTATGATCTTGGCAAACACTGAGATAAACTTGAATGAAGATTCAGTTGATGTTCATGTCTTGCCAGCAACTCTGGTAGGATTTGATGAATCAGTGAAATTAAAAGCTTACATAAACTCTACAAGAAAACCCCTTGCTAGGATTGAGTTTGGAGGAACTGTGATAGGGAACTCTAGAGCTCCAGCAGTGGCAACATTCTCTGCAAGAGGACCAAGCTTCACCAACCCTTCAATTCTCAAACCTGATGTTGTAGCTCCTGGTGTCAACATCATTGCTGCATGGCCTCAGAACCTTGGTCCTACAAGCCTTCCACAGGATCTTAGAAGAGTGAACTTCTCAGTCATGTCTGGTACCTCAATGTCATGTCCTCATGTTAGCGGAATTGCGGCTCTTGTTCATTCAGCTCACCCGAAATGGAGTCCTGCCGCTATCAAATCAGCAATAATGACAACAGCTGATGTAACTGATCACATGAAAAGACCAATTCTAGATGAAGACAAACCAGCTGGTGTTTTTGCTATTGGAGCAGGAAATGTGAATCCACAAAGAGCATTGAACCCAGGACTTGTGTATGACATCAAACCAGATGACTATGTAACCCATCTTTGTAGCCTTGGATACACAAGTTCTGAGATTTTCAGCATCACACACAGGAATGTGAGCTGCTATGAAATCATGAAGGTGAATAGAGGCTTCAGCCTGAACTATCCTTCATTCTCAGTCATTTTTAAGAGTGGGATGAGCAGAAAGATGTTCAGCAGGAGGGTCACAAATGTGGGGGATCCTAACTCCATCTACTCAGTGGAGGTTATGGCACCTGAAGGGGTGAAAGTGATTGTGAAACCCAAGAGGCTTGTGTTCAAAGAAACAAATGAGAGGTTAAGTTACAGGGTGTACTTTTTGTCAAGAAAAAGAGTTAGAAAAGGTGCTGATATGATGACTTTTGCAGAAGGGCATTTGACATGGGTCAGCTCACAAAATGGTTCTCACAGGGTTAGAAGCCCAATAGCAGTGACTTGGAAGTCCAAGTAG 3906 0.4619 MRRRPVAGLLPDQMEKSTAKYHNSRICFLASLSAFFWFLLLYFHFVQEQTRKSIGFPDLKEEQESPEEKIFPFTRALRTAENKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSKWTNMCKFTTNAGLGPPLENIDGVFSDTGWYATNQFAVDVIFSNRMKQYECLTRDSSIAAAIFVPFYAGFDIARYLWGSNITMRDSASLALVDWLMKKPEWGIMNGRDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDEDVFNWQDRMRGLERKWLFSFAGAPRPDNPKSIRGQIIEQCRSSKVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDLRKRKISIEERLSQIPQEQVRMMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDVIEGRVDENFIEENSWKYEFLDEGQREVGPHEWDPFFSKPKDGGGDSTPPTHSMESKLQILFLTLFISSLTIHAQTLRTYIVQLHPHGTTTSFFTSKQEWHLSFIQQTISSDEDPSLRLLYSYRSAMDGFAAQLTDSELEFLQNLPDVISVKPDRKVQIQTTYSYKFLGLNPARENGWYQSGFGHGTIIGVLDTGVWPESPSFNDHGMPPVPKKWKGACQAGQAFNSSICNKKLIASNRYFTKGHLAVSPSRIPEYLSPRDSSGHGTHTSSTAGGVPVPNAGVFGYAEGVARGMAPGAHIAVYKVCWFNGCYNSDILAAMDVAIRDGVDILSLSLGGFPVPLYDDSIAIGSFRAMEHGISVVCAAGNNGPSAMSVANEAPWINTVGASTLDRKFPASVHMGNGQVLYGESMYPAATNRVRSNHEELELVYLTEGDIESQFCLRGSLPREKVQGKMVVCDRGVNGRAEKGQVVKESGGAGMILANTEINLNEDSVDVHVLPATLVGFDESVKLKAYINSTRKPLARIEFGGTVIGNSRAPAVATFSARGPSFTNPSILKPDVVAPGVNIIAAWPQNLGPTSLPQDLRRVNFSVMSGTSMSCPHVSGIAALVHSAHPKWSPAAIKSAIMTTADVTDHMKRPILDEDKPAGVFAIGAGNVNPQRALNPGLVYDIKPDDYVTHLCSLGYTSSEIFSITHRNVSCYEIMKVNRGFSLNYPSFSVIFKSGMSRKMFSRRVTNVGDPNSIYSVEVMAPEGVKVIVKPKRLVFKETNERLSYRVYFLSRKRVRKGADMMTFAEGHLTWVSSQNGSHRVRSPIAVTWKSK* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0978 1301 Pfam Subtilase family 664 1114 IPR000209 GO:0006508|GO:0008236
Lja1g0978 1301 Pfam Peptidase inhibitor I9 559 639 IPR010259 -
Lja1g0978 1301 Gene3D Peptidase S8/S53 domain 666 1156 IPR036852 GO:0004252|GO:0006508
Lja1g0978 1301 SUPERFAMILY Subtilisin-like 646 1148 IPR036852 GO:0004252|GO:0006508
Lja1g0978 1301 Pfam PA domain 916 988 IPR003137 -
Lja1g0978 1301 Gene3D - 871 1013 - -
Lja1g0978 1301 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 554 1298 - -
Lja1g0978 1301 MobiDBLite consensus disorder prediction 512 532 - -
Lja1g0978 1301 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 548 639 IPR037045 -
Lja1g0978 1301 CDD Peptidases_S8_3 637 1111 IPR034197 -
Lja1g0978 1301 ProSitePatterns Serine proteases, subtilase family, serine active site. 1075 1085 IPR023828 -
Lja1g0978 1301 Gene3D - 1160 1298 - -
Lja1g0978 1301 Pfam Exostosin family 87 424 IPR040911 -
Lja1g0978 1301 Pfam Fibronectin type-III domain 1192 1296 IPR041469 -
Lja1g0978 1301 ProSiteProfiles Serine proteases, subtilase domain profile. 642 1143 - -
Lja1g0978 1301 SUPERFAMILY Protease propeptides/inhibitors 577 639 - -
Lja1g0978 1301 PRINTS Subtilisin serine protease family (S8) signature 1074 1090 IPR015500 -
Lja1g0978 1301 PRINTS Subtilisin serine protease family (S8) signature 664 683 IPR015500 -
Lja1g0978 1301 PRINTS Subtilisin serine protease family (S8) signature 741 754 IPR015500 -
Lja1g0978 1301 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 554 1298 IPR045051 -
Lja1g0978 1301 CDD PA_subtilisin_like 877 1006 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0978 Lja-Chr1 9719077 9726765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0978 534 1300 Subtilisin-like Serine Gene Family AT1G04110 66.026 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0978 - - pvu:PHAVU_001G165300g 1819.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0978 1 9719077 9726765 Lja1g0978 1 9719077 9726765 ECH
Lja1g0978 1 9719077 9726765 Lja5g2106 5 28686739 28689217 PCT